PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC06G06690.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 370aa MW: 39665.6 Da PI: 7.5508

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC06G06690.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.9	5.1e-14	251	305	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +r+rr++kNRe+A rsR+RK+a+i eLe +v++L+++ +L+ ++ ++++k k+e OPUNC06G06690.1 251 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQKAELQ---KKQVEMIQKQKDE 305 79*************************************998...5555555555555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-12	247	312	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.657	249	294	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.47E-24	251	305	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.3E-14	251	303	No hit	No description
Pfam	PF00170	3.4E-11	251	295	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.22E-10	251	296	No hit	No description
PROSITE pattern	PS00036	0	254	269	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence Send to blast
MELPAEGSAL ARQGSIYSLT FDEFQSALGS AGKDFGSMNM DELLRNIWTA EESQAIATAT 60 PPAAAAAAAV VGDAQQQQPI QRQGSLTLPR TLSQKTVDEV WRDIMGFGGD DDDDPAAAAA 120 APPAAAPAQQ AQRQPTLGEM TLEEFLVRAG VVREDMGQTI VLPPQAQALF PGSNVVAPAM 180 QLGNGMLPGV VGVAPGAAAA MSVAAPATPV VLNGLGKVEG GDLSSLSPVP YPFDTALRVR 240 KGPTVEKVVE RRQRRMIKNR ESAARSRARK QAYIMELEAE VAKLKEQKAE LQKKQVEMIQ 300 KQKDEVMERI TQQLGPKAKR FCLRRTLTGP CCCICSVCCC CVDMSSRLQF SDSVLYPSLR 360 GFSFSNLRVI

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence Send to blast

MELPAEGSAL ARQGSIYSLT FDEFQSALGS AGKDFGSMNM DELLRNIWTA EESQAIATAT  60
PPAAAAAAAV VGDAQQQQPI QRQGSLTLPR TLSQKTVDEV WRDIMGFGGD DDDDPAAAAA  120
APPAAAPAQQ AQRQPTLGEM TLEEFLVRAG VVREDMGQTI VLPPQAQALF PGSNVVAPAM  180
QLGNGMLPGV VGVAPGAAAA MSVAAPATPV VLNGLGKVEG GDLSSLSPVP YPFDTALRVR  240
KGPTVEKVVE RRQRRMIKNR ESAARSRARK QAYIMELEAE VAKLKEQKAE LQKKQVEMIQ  300
KQKDEVMERI TQQLGPKAKR FCLRRTLTGP CCCICSVCCC CVDMSSRLQF SDSVLYPSLR  360
GFSFSNLRVI

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269\|PubMed:19947981, ECO:0000269\|PubMed:20576316, ECO:0000269\|PubMed:21546455, ECO:0000269\|PubMed:22301130, ECO:0000269\|PubMed:26300907, ECO:0000269\|PubMed:27468891}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269\|PubMed:18315698, ECO:0000269\|PubMed:20576316, ECO:0000269\|PubMed:21546455, ECO:0000269\|PubMed:22301130}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK103188	0.0	AK103188.1 Oryza sativa Japonica Group cDNA clone:J033121M03, full insert sequence.
GenBank	AK105312	0.0	AK105312.1 Oryza sativa Japonica Group cDNA clone:001-117-D06, full insert sequence.
GenBank	GU552783	0.0	GU552783.1 Oryza sativa Japonica Group putative expressed bZIP transcription factor mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015640996.1	1e-179	bZIP transcription factor 46-like
Swissprot	Q69TW5	1e-180	BZP46_ORYSJ; bZIP transcription factor 46
TrEMBL	A0A0E0L982	0.0	A0A0E0L982_ORYPU; Uncharacterized protein
STRING	OPUNC06G06690.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-41	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Hossain MA, et al. The ABRE-binding bZIP transcription factor OsABF2 is a positive regulator of abiotic stress and ABA signaling in rice. J. Plant Physiol., 2010. 167(17): p. 1512-20 [PMID:20576316] Yang X, et al. Rice ABI5-Like1 regulates abscisic acid and auxin responses by affecting the expression of ABRE-containing genes. Plant Physiol., 2011. 156(3): p. 1397-409 [PMID:21546455] Li YS, et al. A novel nuclear protein phosphatase 2C negatively regulated by ABL1 is involved in abiotic stress and panicle development in rice. Mol. Biotechnol., 2013. 54(2): p. 703-10 [PMID:23086454] Guo C,Ge X,Ma H The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant Mol. Biol., 2013. 82(3): p. 239-53 [PMID:23686450] Huang X, et al. OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.). ScientificWorldJournal, 2014. 2014: p. 809353 [PMID:25089296] Kim N, et al. Functional characterization and reconstitution of ABA signaling components using transient gene expression in rice protoplasts. Front Plant Sci, 2015. 6: p. 614 [PMID:26300907] Chen H, et al. Characterization of OsPM19L1 encoding an AWPM-19-like family protein that is dramatically induced by osmotic stress in rice. Genet. Mol. Res., 2015. 14(4): p. 11994-2005 [PMID:26505346] Tang N, et al. MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice. Plant Cell, 2016. 28(9): p. 2161-2177 [PMID:27468891]