PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G07550.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 210aa    MW: 22480.8 Da    PI: 4.4246
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G07550.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.9e-181464155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ++ykGVr +  +g+WvAeIr p++   r+r++lg+++t+e+Aa+a +aa  +l+g
  OPUNC06G07550.1 14 KKYKGVRLRQ-WGKWVAEIRLPNS---RQRVWLGSYDTPEKAARAFDAAFVCLRG 64
                     59*****998.**********933...5*********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.81E-241477No hitNo description
PfamPF008478.8E-111563IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-181575IPR016177DNA-binding domain
PROSITE profilePS5103220.9821575IPR001471AP2/ERF domain
SMARTSM003802.1E-301581IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-261576IPR001471AP2/ERF domain
PRINTSPR003674.0E-91627IPR001471AP2/ERF domain
PRINTSPR003674.0E-93854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MHTQTNTAAP APEKKYKGVR LRQWGKWVAE IRLPNSRQRV WLGSYDTPEK AARAFDAAFV  60
CLRGAGANAA GLNFTESPPP AAARTRDLRE VYASAVSHAN QPPPLPVSGE TAATTPTELA  120
GAAAQEHDEV SENSVPLPLP PPVQVAAPAG SFDWSQLMAN SPPLYSPVAM GSHAYDDVAG  180
WSATLPVAEF REEDDEDEGA TSDELWSFDV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025882388.19e-92ethylene-responsive transcription factor ERF018-like
TrEMBLA0A0E0L9H71e-150A0A0E0L9H7_ORYPU; Uncharacterized protein
STRINGOPUNC06G07550.11e-151(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-29ERF family protein