PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G09770.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 465aa    MW: 50564.9 Da    PI: 7.4324
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G09770.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-10175217446
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                       k +rr+++NReAAr+sR RKka+i++Le    +L++  ++L+
  OPUNC06G09770.1 175 QKMQRRLAQNREAARKSRMRKKAYIQQLESSRSKLTQLEQELQ 217
                      589**************************99999998877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-8172270IPR004827Basic-leucine zipper domain
PfamPF077161.0E-7174218IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.841174218IPR004827Basic-leucine zipper domain
CDDcd147087.72E-21176228No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-8176220No hitNo description
SuperFamilySSF579591.25E-7176219No hitNo description
PROSITE patternPS000360179194IPR004827Basic-leucine zipper domain
PfamPF141446.1E-31260336IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MHHHPSHVFS SCRAEEQQQQ GGIGTAGYHI GDGAIFPHHL LPPPPDLPLL RSSPNPSSKS  60
SSNLTAGGHL PPPLAAAQQH GVAVGGMAAQ GMATAADRFC LPRMAAAAAA ASQLENWGDS  120
GVVVSSPFTD DTSTDLDDSA DKHHHHHALM GGGAGGGEQR GADSSAVSKE RTGDQKMQRR  180
LAQNREAARK SRMRKKAYIQ QLESSRSKLT QLEQELQRAR QQGIFIATGG SGDHGRSIGG  240
NGTLAFDLEY ARWLDEHQRH INDLRVAMNA QMSDDELRVL VDAVMMHYDQ VFRLKSFATK  300
SDVFHVLSGM WMSPAERFFM WLGGFRSSEL LKVLASHLEP LTDQQLMGIC NLQQSSQQAE  360
DALSQGMEAL QQTLGDTLAA AAATVVGGGG ADNVTNYMGQ MAIAMAKLTT LENFLRQADL  420
LRHQTLQQMH RILTTRQAAR ALLVISDYFS RLRALSSLWL ARPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1097190.0AK109719.1 Oryza sativa Japonica Group cDNA clone:002-146-A04, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642107.10.0transcription factor TGAL3-like isoform X1
SwissprotQ5Z6N90.0TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLA0A0E0LA840.0A0A0E0LA84_ORYPU; Uncharacterized protein
STRINGOPUNC06G09770.20.0(Oryza punctata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-107bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]