PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G09770.2
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 514aa    MW: 55845.2 Da    PI: 7.6286
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G09770.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.7e-10224266446
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                       k +rr+++NReAAr+sR RKka+i++Le    +L++  ++L+
  OPUNC06G09770.2 224 QKMQRRLAQNREAARKSRMRKKAYIQQLESSRSKLTQLEQELQ 266
                      589**************************99999998877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-8221319IPR004827Basic-leucine zipper domain
PfamPF077161.2E-7223267IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.841223267IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-8225269No hitNo description
SuperFamilySSF579591.44E-7225268No hitNo description
CDDcd147082.65E-21225277No hitNo description
PROSITE patternPS000360228243IPR004827Basic-leucine zipper domain
PfamPF141447.1E-31309385IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    Send to blast
MHHHPSHVFS SCRAEEQQQQ GGIGTAGYHI GDGAIFPHHL LPPPPDLPLL RSSPNPSSKS  60
SSNLTAGGHL PPPLAAAVSL AFVNSSQLGL LDLILGLMQC YQQQHGVAVG GMAAQGMATA  120
ADRFCLPRMA AAAAAASQLE NWGDSGVVVS SPFTDDTSTD LDDSADKHHH HHALMLPPLA  180
AVFLVWLHRS NAASRGVSQG GGAGGGEQRG ADSSAVSKER TGDQKMQRRL AQNREAARKS  240
RMRKKAYIQQ LESSRSKLTQ LEQELQRARQ QGIFIATGGS GDHGRSIGGN GTLAFDLEYA  300
RWLDEHQRHI NDLRVAMNAQ MSDDELRVLV DAVMMHYDQV FRLKSFATKS DVFHVLSGMW  360
MSPAERFFMW LGGFRSSELL KVLASHLEPL TDQQLMGICN LQQSSQQAED ALSQGMEALQ  420
QTLGDTLAAA AATVVGGGGA DNVTNYMGQM AIAMAKLTTL ENFLRQADLL RHQTLQQMHR  480
ILTTRQAARA LLVISDYFSR LRALSSLWLA RPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1097190.0AK109719.1 Oryza sativa Japonica Group cDNA clone:002-146-A04, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642107.10.0transcription factor TGAL3-like isoform X1
RefseqXP_025881815.10.0transcription factor TGAL3-like isoform X2
SwissprotQ5Z6N90.0TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLA0A0E0LA850.0A0A0E0LA85_ORYPU; Uncharacterized protein
STRINGOPUNC06G09770.20.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-106bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]