PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G09770.3
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 490aa    MW: 53273.2 Da    PI: 7.261
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G09770.3genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.6e-10200242446
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                       k +rr+++NReAAr+sR RKka+i++Le    +L++  ++L+
  OPUNC06G09770.3 200 QKMQRRLAQNREAARKSRMRKKAYIQQLESSRSKLTQLEQELQ 242
                      589**************************99999998877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-8197295IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.841199243IPR004827Basic-leucine zipper domain
PfamPF077161.1E-7199243IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-7201244No hitNo description
CDDcd147087.70E-21201253No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-8201245No hitNo description
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
PfamPF141446.6E-31285361IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MHHHPSHVFS SCRAEEQQQQ GGIGTAGYHI GDGAIFPHHL LPPPPDLPLL RSSPNPSSKS  60
SSNLTAGGHL PPPLAAAVSL AFVNSSQLGL LDLILGLMQC YQQQHGVAVG GMAAQGMATA  120
ADRFCLPRMA AAAAAASQLE NWGDSGVVVS SPFTDDTSTD LDDSADKHHH HHALMGGGAG  180
GGEQRGADSS AVSKERTGDQ KMQRRLAQNR EAARKSRMRK KAYIQQLESS RSKLTQLEQE  240
LQRARQQGIF IATGGSGDHG RSIGGNGTLA FDLEYARWLD EHQRHINDLR VAMNAQMSDD  300
ELRVLVDAVM MHYDQVFRLK SFATKSDVFH VLSGMWMSPA ERFFMWLGGF RSSELLKVLA  360
SHLEPLTDQQ LMGICNLQQS SQQAEDALSQ GMEALQQTLG DTLAAAAATV VGGGGADNVT  420
NYMGQMAIAM AKLTTLENFL RQADLLRHQT LQQMHRILTT RQAARALLVI SDYFSRLRAL  480
SSLWLARPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1097190.0AK109719.1 Oryza sativa Japonica Group cDNA clone:002-146-A04, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642107.10.0transcription factor TGAL3-like isoform X1
RefseqXP_025881815.10.0transcription factor TGAL3-like isoform X2
SwissprotQ5Z6N90.0TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLA0A0E0LA860.0A0A0E0LA86_ORYPU; Uncharacterized protein
STRINGOPUNC06G09770.20.0(Oryza punctata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-107bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]