PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G19120.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 448aa    MW: 49436.3 Da    PI: 9.9346
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G19120.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.91.6e-11140168533
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                      k  rr+++NReAAr+sR+RKk +i++Le+
  OPUNC06G19120.1 140 KTLRRLAQNREAARKSRLRKKVYIQQLET 168
                      7789***********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.4E-8135179No hitNo description
SMARTSM003381.6E-6136208IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.92E-7140170No hitNo description
PfamPF001702.0E-8140168IPR004827Basic-leucine zipper domain
PROSITE patternPS000360143158IPR004827Basic-leucine zipper domain
PfamPF141441.9E-23219291IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MSKVIKIRKL EAQLFGLRKR RNPEGYDMPS DLDQALLLYF DGQEQDKPST QEEPHKPLNF  60
VKETLNIFPS QPMDGEPKAS TSAPPIAGSS RRSPAPAAAE GRPLAVGKTS KATFKSGGGG  120
GATAASASSE LEGPKTPDPK TLRRLAQNRE AARKSRLRKK VYIQQLETGR IRLAHLEQEI  180
RLTRAQGAIW GAGTLSPDAA LFNLEYERWQ EAHHQVIGRL RATVEEHRPD SELQPHVDEA  240
VSHYGVLMAH KARLVGADPI HLLFGLWKGA VEQCFLWIGD FRPSELIKVV IRHVEPLTEQ  300
QLAAVYSAQQ AARREEDALD GALHALLRSL SDVVSSSDAP AAASSSSQQT PPVMYHRHHP  360
PAAAAAMAAA SFMGQYGCHN NLQFAMDKLA SFATFLRQAD EVRMRTLHAL RRMLTVRQAA  420
RCFVAVDDYF GRLRALALFW TTTRQPAG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1199090.0AK119909.1 Oryza sativa Japonica Group cDNA clone:002-183-A10, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015644001.10.0transcription factor TGAL8 isoform X2
SwissprotQ69T210.0TGAL8_ORYSJ; Transcription factor TGAL8
TrEMBLA0A0E0LDI60.0A0A0E0LDI6_ORYPU; Uncharacterized protein
STRINGOPUNC06G19120.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129722126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.13e-85bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]