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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | OPUNC07G06790.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family | bZIP | ||||||||
| Protein Properties | Length: 746aa MW: 76839.4 Da PI: 7.0542 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 76.8 | 2.8e-24 | 272 | 334 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+eL++eN+aL++el++lkk ++ +++e+
OPUNC07G06790.1 272 ERELKRERRKQSNRESARRSRLRKQQECEELARKVAELTTENSALRSELDQLKKACEDMEAEN 334
89*********************************************************9987 PP
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| 2 | bZIP_1 | 76.8 | 2.8e-24 | 623 | 685 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+eL++eN+aL++el++lkk ++ +++e+
OPUNC07G06790.1 623 ERELKRERRKQSNRESARRSRLRKQQECEELARKVAELTTENSALRSELDQLKKACEDMEAEN 685
89*********************************************************9987 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF16596 | 1.5E-7 | 140 | 249 | No hit | No description |
| Gene3D | G3DSA:1.20.5.170 | 5.5E-18 | 269 | 331 | No hit | No description |
| SMART | SM00338 | 3.4E-22 | 272 | 336 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 1.2E-21 | 272 | 334 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 13.553 | 274 | 337 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 4.43E-11 | 275 | 330 | No hit | No description |
| CDD | cd14702 | 1.79E-21 | 277 | 327 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 279 | 294 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF16596 | 1.5E-7 | 491 | 600 | No hit | No description |
| Gene3D | G3DSA:1.20.5.170 | 5.5E-18 | 620 | 682 | No hit | No description |
| SMART | SM00338 | 3.4E-22 | 623 | 687 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 1.2E-21 | 623 | 685 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 13.553 | 625 | 688 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 4.43E-11 | 626 | 681 | No hit | No description |
| CDD | cd14702 | 1.79E-21 | 628 | 678 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 630 | 645 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 746 aa Download sequence Send to blast |
MASSSDEQPK PPEPPAAAVA GTGTGTAVAT AAASAAPTHA EWAASLQAYY AAGGHPYAWP 60 AQHLMAAAAA GAPYGAPVPF PMYHPGAAAA YYAHASMAAG VPYPTAEAVA AAAAAAAAAA 120 GVVPEGKGKG KGAGASPEKG SSAAPSGDDA SRSGDSGSEE SSDTRDDDTD HKDSSAPKKR 180 KSGNTSAEGE PSQATLVPYA AVESPYPLKG RSASKLPVSA PGRAALPNAT PNLNIGIDLW 240 STPPALAVPA GQGEASPGLA LARRDGVAPL DERELKRERR KQSNRESARR SRLRKQQECE 300 ELARKVAELT TENSALRSEL DQLKKACEDM EAENTRLMGD KAQYKGPTVT TTLGMSIDSS 360 KTQHHDDEGQ LHKNTNNNSN GNYVGGSHKP EANSSPSHNS PGPCRAVPKS QPYHLMAAAA 420 AGAPYGAPVP FPMYHPGAAA AYYAHASMAA GVPYPTAEAV AAAAAAAAAA AGVVPEGKGK 480 GKGAGASPEK GSSAAPSGDD ASRSGDSGSE ESSDTRDDDT DHKDSSAPKK RKSGNTSAEG 540 EPSQATLVPY AAVESPYPLK GRSASKLPVS APGRAALPNA TPNLNIGIDL WSTPPALAVP 600 AGQGEASPGL ALARRDGVAP LDERELKRER RKQSNRESAR RSRLRKQQEC EELARKVAEL 660 TTENSALRSE LDQLKKACED MEAENTRLMG DKAQYKGPTV TTTLGMSIDS SKTQHHDDEG 720 QLHKNTNNNS NGNYVGGSHK PEANSR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 639 | 645 | RRSRLRK |
| 2 | 639 | 646 | RRSRLRKQ |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Interacts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. | |||||
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Nucleotide ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | |||
| GenBank | AK289179 | 0.0 | AK289179.1 Oryza sativa Japonica Group cDNA, clone: J100028J17, full insert sequence. | |||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_015644731.1 | 0.0 | DNA-binding protein EMBP-1 | ||||
| Swissprot | P25032 | 6e-57 | EMBP1_WHEAT; DNA-binding protein EMBP-1 | ||||
| TrEMBL | A0A0E0LIG3 | 0.0 | A0A0E0LIG3_ORYPU; Uncharacterized protein | ||||
| STRING | OPUNC07G06790.1 | 0.0 | (Oryza punctata) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP2160 | 36 | 92 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G35530.1 | 2e-22 | basic region/leucine zipper transcription factor 16 | ||||




