PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G07230.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 377aa    MW: 40017.8 Da    PI: 4.7423
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G07230.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN347.93.5e-15107216152257
                      S.SSSSS-TTS--TTT--...HHHH---S--HHHHHHT--TT--......-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTT CS
             EIN3 152 m.qhcdppqrrfplekgv...epPWWPtGkelwwgelglskdqg.....tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqd 236
                      m q c+pp      ++g    +pPWWPt ke wwg+  +++  g     + p+  p+ l ka kv+vL av+kh++p++ ++   + +s+    
  OPUNC07G07230.1 107 MaQECTPPLVTRDRKNGAtppPPPWWPTAKEPWWGTEVAAHLRGrpmatPVPFASPRRLVKAEKVAVLVAVVKHVAPDFGRLAAAAGRSR---- 196
                      558999997666666665222578***********6655544448999888****************************99988877764.... PP

                      T--SHHHHHHHHHHTTTTT-S CS
             EIN3 237 kmsakesfallsvlnqeekec 257
                        +  es ++ s l+ e++ +
  OPUNC07G07230.1 197 -LTELESSIWESALRGERERY 216
                      .45566666666666666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.103.6E-3486222IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048733.7E-1590197No hitNo description
SuperFamilySSF1167681.7E-3890216IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MASNSNSKRS SSSSIDQQHA KRRRRAPGDE LSQTLGVASN AVVGVNGVAP LMLSPVTMQV  60
QLLCYVAMPM AVAAASSSPA AGGGVVPLAV ALCRLYNGTL ERMVREMAQE CTPPLVTRDR  120
KNGATPPPPP WWPTAKEPWW GTEVAAHLRG RPMATPVPFA SPRRLVKAEK VAVLVAVVKH  180
VAPDFGRLAA AAGRSRLTEL ESSIWESALR GERERYVVMM PSFILLPPPP PQHVHSAESA  240
AAHADPEPES ADQSVVDFSV SGEDAAARGS GSEDTATTGP ELEQLVGNVN GATAAAHAVE  300
EEGQKPEDTP GPPLLEEHGG EDHDHHLYLH GDFSGEVSGA AAADVAPPED VDWFDYDEVL  360
RGLDELEIPS FFGGYYV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A3e-139021210128ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0037400.0AP003740.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1118_B03.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645905.11e-154putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A0E0LIL00.0A0A0E0LIL0_ORYPU; Uncharacterized protein
STRINGOPUNC07G07230.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1804988