PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G11930.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 274aa    MW: 29690.1 Da    PI: 5.4171
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G11930.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.44.4e-26106162358
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                      D y WrKYGqK + g++fpr+YYrC+++ gC+++k+v++s++dp+ +e+tY g H++
  OPUNC07G11930.1 106 DAYPWRKYGQKGILGTRFPRNYYRCAQRsGCSARKQVQQSDDDPSQLEVTYVGAHTC 162
                      99*************************99**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182908.24E-2499163IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.3E-25103163IPR003657WRKY domain
SMARTSM007742.2E-30104164IPR003657WRKY domain
PROSITE profilePS5081120.885106160IPR003657WRKY domain
PfamPF031068.6E-25106162IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MAGGGKAATE KHILRAQKST NQLKAMVANL LPPPPAGNSA GAVEVEAILS DISDSLSQAL  60
ASLQIDGTSD EPPEARLSVS RRSGQRRSRA DGSSRTVMLR YGDPGDAYPW RKYGQKGILG  120
TRFPRNYYRC AQRSGCSARK QVQQSDDDPS QLEVTYVGAH TCGDRTSSPA AISLVDEARW  180
NTATSHPRLQ KWEDVVPASE SMACTPSMEE DIAAPWLLIP SPACSQSELL SEAAAVEVPE  240
LRQDASPTRQ VEHKKARDDD EFVALHDSVV PDFM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-181031601574Disease resistance protein RRS1
5w3x_D4e-181031601574Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645532.11e-64uncharacterized protein LOC107278742 isoform X1
RefseqXP_015694621.13e-65PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A0E0LK870.0A0A0E0LK87_ORYPU; Uncharacterized protein
STRINGOPUNC07G11930.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141862125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.16e-21WRKY DNA-binding protein 55