PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G15160.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 184aa    MW: 21037.4 Da    PI: 9.8009
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G15160.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM621.9e-19201452127
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknr.atksgyWkatgkdk 90 
                      p  frF  +d+el+   L  k++g +    l+ v+++++i++++P +L  + ++ e +  +yfFs  + k+a+ k+ +r + + g+Wka   ++
  OPUNC07G15160.1  20 PHNFRFMLEDQELL-VILDDKLHGAPldRALDAVFHDTRILDFHPAKLYgMYTEDEANgYIYFFSMIEFKAAKPKKWSRsVGQGGRWKAVLGSR 112
                      6779**********.56*********53333456**************8333333444455***********9999999677899***987777 PP

              NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      ++++ +g  v  k t+ fy     kg+ t+W mhe+ 
  OPUNC07G15160.1 113 RMVEVGGVIVSRKLTMEFY----VKGVTTNWGMHEFV 145
                      77777**************....8999********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.45E-2514153IPR003441NAC domain
PROSITE profilePS5100520.01119164IPR003441NAC domain
PfamPF023655.1E-920144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MAALGDGEEK KAGKNKHGFP HNFRFMLEDQ ELLVILDDKL HGAPLDRALD AVFHDTRILD  60
FHPAKLYGMY TEDEANGYIY FFSMIEFKAA KPKKWSRSVG QGGRWKAVLG SRRMVEVGGV  120
IVSRKLTMEF YVKGVTTNWG MHEFVRITAP TRRASLIQRK IIGVLKDFIP IELFFEMAIN  180
PEQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1099041e-133AK109904.1 Oryza sativa Japonica Group cDNA clone:002-149-F12, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015614522.16e-83uncharacterized protein LOC4348616
TrEMBLA0A0E0LLD41e-134A0A0E0LLD4_ORYPU; Uncharacterized protein
STRINGOPUNC07G15160.11e-134(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35632367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.11e-09NAC domain containing protein 41