PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G25150.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 600aa    MW: 65894 Da    PI: 5.5985
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G25150.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3494.55.5e-151734691354
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                      eel++rmw+d++++krlke ++++ +++++      g +++++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+gasd+
  OPUNC07G25150.1  73 EELERRMWRDRVRHKRLKELQQSRGGRESRPgeigGGGRQQRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDN 166
                      8*********************988666665888889999****************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHH CS
             EIN3  91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgel 184
                      Lr+WWkekv+fdrngpaai+kyqa+n++++ + +   +  + +hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G+e+ww+e+
  OPUNC07G25150.1 167 LRSWWKEKVRFDRNGPAAIAKYQADNAVPGCDGDVGGAVPAGPHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGTEAWWPEA 260
                      *********************************99888******************************************************** PP

                      T--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXX CS
             EIN3 185 glskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.slrkqspkvt 275
                      g++k+ g+ppykkphdlkkawkv+vLtavikhmsp+++++r+l+rqsk+lqdkm+ake  ++l+vl+qee+++ ++++   ++  +  ++ +++
  OPUNC07G25150.1 261 GVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKLHPGalPPpLSAAGALSLN 354
                      ******************************************************************************9874435566999*** PP

                      XXXXXXXXXX.XXXXXX.XXXXXXXXXX...............................XXXXXXXXXXXXX.XXXXXXXX.........XXXX CS
             EIN3 276 lsceqkedve.gkkeskikhvqavktta...............................gfpvvrkrkkkps.esakvssk...evsrtcqssq 333
                      +s + ++dve  + ++  ++ q+  t a                               ++++v+kr ++ + e++ + s+     ++tc++ q
  OPUNC07G25150.1 355 ASISGEYDVEgIDGDEAGNNLQKAPTDAtafmdlttmdvalsnnkflimpaalmkeeaiDVDFVQKRSAPAGgEPELMLSSnnhTRVYTCDNVQ 448
                      **********734444445666666655889************************************98775255665544333678******* PP

                      XXX.XXXXXXXXXXXXXXXXX CS
             EIN3 334 frgsetelifadknsisqney 354
                      +++s+++l+f d+n+++ ++y
  OPUNC07G25150.1 449 CPHSNYALGFLDRNERNAHQY 469
                      *******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.1E-12873330No hitNo description
Gene3DG3DSA:1.10.3180.101.2E-70209338IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.4E-58210333IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    Send to blast
MMGAAVTMVD QRMAFAAEAD VDSKAAFGFF GGECFVGEGD LVNPAPPSQQ VHEGGFAAED  60
ESGDDDDDVD DIEELERRMW RDRVRHKRLK ELQQSRGGRE SRPGEIGGGG RQQRQSQEQA  120
RRKKMSRAQD GILKYMLKMM EVCNAQGFVY GIIPEKGKPV SGASDNLRSW WKEKVRFDRN  180
GPAAIAKYQA DNAVPGCDGD VGGAVPAGPH SLHELQDTTL GSLLSALMQH CDPPQRRFPL  240
EKGVPPPWWP EGTEAWWPEA GVPKELGPPP YKKPHDLKKA WKVAVLTAVI KHMSPDVDKV  300
RRLVRQSKCL QDKMTAKEIV TWLAVLKQEE DLYLKLHPGA LPPPLSAAGA LSLNASISGE  360
YDVEGIDGDE AGNNLQKAPT DATAFMDLTT MDVALSNNKF LIMPAALMKE EAIDVDFVQK  420
RSAPAGGEPE LMLSSNNHTR VYTCDNVQCP HSNYALGFLD RNERNAHQYA CKHNAAAESK  480
APPHLFEPLG GFDFDLPVDG QRCLAGLMTM YDTDVAATQR NDTLLNNGMH HHHHQQQQQQ  540
QANFFIRDDA PFGGDVTATA AAAPEFRFSS NFNVSGGGAV DYGGAMQQPP AKYVGSNWFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-702073381132Protein ETHYLENE INSENSITIVE 3
4zds_B5e-702073381132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646574.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3L90.0EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2
TrEMBLA0A0E0LPX80.0A0A0E0LPX8_ORYPU; Uncharacterized protein
STRINGOPUNC07G25150.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-149ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]