PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC08G04500.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 448aa    MW: 49037.1 Da    PI: 6.8027
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC08G04500.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.15.8e-11104135334
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                      ++k +rr+++NReAAr+sR+RKka+i++Le+ 
  OPUNC08G04500.1 104 RDKIQRRLAQNREAARKSRLRKKAYIQNLETS 135
                      7899*************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.4E-6102181IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.531104146IPR004827Basic-leucine zipper domain
PfamPF001706.0E-8104138IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.19E-7106147No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-8107151No hitNo description
PROSITE patternPS000360109124IPR004827Basic-leucine zipper domain
PfamPF141445.3E-28190265IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MTSAPAAQFA APAPAAMGIY ERRHQHHPLA AGVWGDQPFI RPDTTGSSNN NAAAAAALPA  60
AMVVAPPLIE PKFESQHGDE DDAALLESPR HLSDSFDQEA SRPRDKIQRR LAQNREAARK  120
SRLRKKAYIQ NLETSRMKLA HLEQEITRAR QQGVYISSSN PSTLPAPIDS GVVTFEVEYA  180
QWVEEQGRQT AELRAALQAR RAAEPELRVL VEAALAHYDK LFTAKREAAR RDVFFVMSGV  240
WRTGAERFFL WIAGFRPSEV IRVLSPQLEP MTERQAADVQ GLQQKARHLE DALSQGMDKL  300
KQTLADSLLA EAVVSTSSSS CAGGAGASPP EESSSSSVAG DGGCYMAQMG SAMGRLNNLV  360
AFVDHVRDDH RSPITTTSIS MSDEQSSLDH PRADNLADAD HLRQETLQNM YKILTLPQAA  420
RGLLALGDYC QRLRALSSLW AARPREPA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1070280.0AK107028.1 Oryza sativa Japonica Group cDNA clone:002-121-A09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025883355.10.0transcription factor TGAL10-like isoform X3
RefseqXP_025883356.10.0transcription factor TGAL10-like isoform X3
SwissprotQ6ZBS80.0TGL10_ORYSJ; Transcription factor TGAL10
TrEMBLA0A0E0LRU60.0A0A0E0LRU6_ORYPU; Uncharacterized protein
STRINGOPUNC08G04500.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-100TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]