PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC08G11250.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 63aa    MW: 7240.18 Da    PI: 5.0837
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC08G11250.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.31.6e-122361243
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAa 43
                     +++G+r++   grW+AeIrd ++ng  + +++ +f+t eeA 
  OPUNC08G11250.1 23 RFRGIRQCT-YGRWAAEIRDKVING--ACVWISTFDTVEEAV 61
                     69******9.7*********77786..************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.1E-122363IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-102363IPR016177DNA-binding domain
PROSITE profilePS5103212.8662363IPR001471AP2/ERF domain
PfamPF008471.1E-52361IPR001471AP2/ERF domain
PRINTSPR003675.2E-52435IPR001471AP2/ERF domain
PRINTSPR003675.2E-54763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 63 aa     Download sequence    Send to blast
MEQEEINEEI PKGGERRPAS KQRFRGIRQC TYGRWAAEIR DKVINGACVW ISTFDTVEEA  60
VLA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006664719.26e-12PREDICTED: ethylene-responsive transcription factor RAP2-2-like
TrEMBLA0A0E0LU842e-38A0A0E0LU84_ORYPU; Uncharacterized protein
STRINGOPUNC08G11250.14e-39(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP156151014
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-11ethylene responsive element binding factor 1