PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC08G18080.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 622aa    MW: 69570.9 Da    PI: 6.5154
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC08G18080.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3413.82e-126384241353
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel +rmwkd+++lkr+ker+++l   ++aa++++k +k+++qa rkk++r QDgiL+YMlk mevcna+GfvYgiip+kgkpv+gas+++raW
  OPUNC08G18080.1  38 EELARRMWKDKIKLKRIKERQQKLA-LHQAALEESKAKKMSDQALRKKTARVQDGILRYMLKLMEVCNARGFVYGIIPDKGKPVSGASENIRAW 130
                      8********************9966.66667*************************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wkekv+fd ngp+a++ky+ +n +l ++++    +  ++hsl +lqD+tlgSLLs+lmqhc+p+qr++pl+kgv+pPWWP+G+e+ww +lgl+k
  OPUNC08G18080.1 131 WKEKVRFDVNGPVAVAKYEVENSMLVDAKRT---GVLNQHSLLDLQDATLGSLLSSLMQHCSPQQRKYPLDKGVPPPWWPSGNEDWWISLGLPK 221
                      **************************99888...89********************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX....XXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss....slrkqspkvtls 277
                        + ppy+kphdlkk+wkv+vLt vikhm+p++++ir+++r+sk+lqdkm+akes ++l vl++ee  + t     s+    s+ +++ + ++s
  OPUNC08G18080.1 222 GIS-PPYRKPHDLKKVWKVGVLTGVIKHMAPNFDKIRNCVRKSKCLQDKMTAKESLIWLGVLRREEIYFCTSDNVgSQithrSSLEGKSDDIYS 314
                      **9.9************************************************************98764443334446555666699999999 PP

                      XXXXXXXXXXXXXX.XXXXXXXXXX....................................XXXXXXXXXXXXXXXXXXXXX......XXXXXX CS
             EIN3 278 ceqkedvegkkeskikhvqavktta....................................gfpvvrkrkkkpsesakvsskevsrtcqssqfr 335
                      +++++dv+  +e+  +++++++ ++                                    g++  rkrk+++++  +++s+     +q++  +
  OPUNC08G18080.1 315 SSDEYDVDHLEEPPRSSSSKDDGRRrqptvqnlqireehtssrhnrgrhdqqpnqvlpsneGTNESRKRKRPSGHFLTAESEVE--VTQKNDNQ 406
                      9*******77777767677766666789999999999**********************9999999999998888888888854..45555555 PP

                      X.XXXXXXXXXXXXXXXX CS
             EIN3 336 gsetelifadknsisqne 353
                         +++ ++++++i+q e
  OPUNC08G18080.1 407 LAIVNNALPNMSRINQME 424
                      5599**********9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.5E-12338286No hitNo description
Gene3DG3DSA:1.10.3180.103.8E-67162288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.84E-61166289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 622 aa     Download sequence    Send to blast
MGNPAILAED LGDTSDFEVD GVENLTENDV SDEEIDAEEL ARRMWKDKIK LKRIKERQQK  60
LALHQAALEE SKAKKMSDQA LRKKTARVQD GILRYMLKLM EVCNARGFVY GIIPDKGKPV  120
SGASENIRAW WKEKVRFDVN GPVAVAKYEV ENSMLVDAKR TGVLNQHSLL DLQDATLGSL  180
LSSLMQHCSP QQRKYPLDKG VPPPWWPSGN EDWWISLGLP KGISPPYRKP HDLKKVWKVG  240
VLTGVIKHMA PNFDKIRNCV RKSKCLQDKM TAKESLIWLG VLRREEIYFC TSDNVGSQIT  300
HRSSLEGKSD DIYSSSDEYD VDHLEEPPRS SSSKDDGRRR QPTVQNLQIR EEHTSSRHNR  360
GRHDQQPNQV LPSNEGTNES RKRKRPSGHF LTAESEVEVT QKNDNQLAIV NNALPNMSRI  420
NQMEMMDMGN QMTSLSHVNT TRTLQHQYVQ GNFVSSPAAV VNNYNSNQIT NVNPSRIYMG  480
YQPLACQNNG HTNRWSGNTF QVDVGPPPIG FTTNCSAGGY HTLPMKQSLP ESMDDHVPIT  540
ETGVLSDSSS YGYHITAKSS GNSTSVAGHG NQLTGDPFDS GTADKFDGNS FDGLPFDFIG  600
NSPIPDIGEL LDDDDIMQYL GT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-611662869129ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126160.0CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015648717.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-137EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0E0LWQ30.0A0A0E0LWQ3_ORYPU; Uncharacterized protein
STRINGOPUNC08G18080.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-131ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]