PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC08G20480.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 461aa    MW: 49361.9 Da    PI: 7.3698
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC08G20480.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.42e-10319375561
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                      kr +r   NR +A rs +RK  +i+eLe kv++L++e ++L  +l +l+  +  l +
  OPUNC08G20480.1 319 KRVKRILANRQSAARSKERKMRYIQELEHKVQVLQTEATTLSAQLTMLQRDSTGLAT 375
                      899******************************************999987766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-18315379IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.829317380IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-12319370No hitNo description
PfamPF001703.1E-9319377IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-11319376No hitNo description
CDDcd147033.67E-22320371No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MDDAGAGDPA ARSHHVSPQP AGQPPVVPRS PTPLDLSSAA AAAAYRRLSP SLRPPAHPQV  60
RLPSPYPQIP SSAAAGSSGH HARSLSQPLF FSLDSLPPLP YADLAAPPAI PPSPPSSSSD  120
PPPPGLPPRK GGHRRSQSDI PFGFSQLSPP LPPPAPVKRE AATAAEGCRS DGDDFALYDL  180
VNSYMDLDGM EALNSSEERH EDRDSRASGT RAGSVADSSE NEAESHSTSV ERKDGGGKSR  240
HCRSLSVDSF IGKLNFDESP KLPLPSPSGG LSRSGSGSLD GGAASLFGAE FANGEFTEAE  300
KKKIMANERL AEIALTDPKR VKRILANRQS AARSKERKMR YIQELEHKVQ VLQTEATTLS  360
AQLTMLQRDS TGLATQNNEL KIRLQAMEQQ AQLRDALNEA LTAEVQRLKL ATGEITDGRM  420
SKGLQQQMNS QLIQLQQLQI QQQQSSQTTQ QGQQQQPQKS A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126160.0CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015651132.10.0transcription factor VIP1
TrEMBLA0A0E0LXK40.0A0A0E0LXK4_ORYPU; Uncharacterized protein
STRINGOPUNC08G20480.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62473650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-83bZIP family protein