PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC09G03170.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 474aa MW: 52139.1 Da PI: 8.3587

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC09G03170.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.8	1.8e-11	188	216	5	33
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le OPUNC09G03170.1 188 KTLRRLAQNREAARKSRLRKKAYIQQLES 216 6789***********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.1E-6	184	246	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.0E-8	186	228	No hit	No description
PROSITE profile	PS50217	8.795	186	228	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.7E-9	188	217	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.13E-7	188	222	No hit	No description
PROSITE pattern	PS00036	0	191	206	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	4.9E-27	273	345	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence Send to blast
MGGSREEDRQ HHNHLPSELP LGFRSSSPTT MIASSSMSKE SSSYDMADFD QASLFLYLDS 60 HDQQSIQEQR QTLNIFPSQP MHVADPDHEA KSAGVAMAML PNGNQLQVLP SHPSKKPDQQ 120 GGQKINSSVP NPPGPNLPLP NSAKDNKNSS LIKGPKKCGL QKEGSSSGKG ATTSSDPERE 180 GRRTLDPKTL RRLAQNREAA RKSRLRKKAY IQQLESSRIR LSQLEQQVHV ARVQGAMLGT 240 GDQHQGLPSG PSAASLFDLE YGRWVEEHSK LIFQLRAALN EQMPDNQLQV FVNGAMAQHD 300 ELLSLKGAIA RADIFHLLCG VWASPAERCF LWLGGFRPSE AIKVMLKQVE PLPEGQLMSI 360 YELQQAAKGT EDALSHAMDS LQQSLSDTVA APDVAAAGGF MGHMSLAMNK ISAMEDVVRQ 420 ADGLRQQTLH KLQHMLTIRQ AARCFVAISD YFHRLRALST LWVARPRPEE GPAM

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence Send to blast

MGGSREEDRQ HHNHLPSELP LGFRSSSPTT MIASSSMSKE SSSYDMADFD QASLFLYLDS  60
HDQQSIQEQR QTLNIFPSQP MHVADPDHEA KSAGVAMAML PNGNQLQVLP SHPSKKPDQQ  120
GGQKINSSVP NPPGPNLPLP NSAKDNKNSS LIKGPKKCGL QKEGSSSGKG ATTSSDPERE  180
GRRTLDPKTL RRLAQNREAA RKSRLRKKAY IQQLESSRIR LSQLEQQVHV ARVQGAMLGT  240
GDQHQGLPSG PSAASLFDLE YGRWVEEHSK LIFQLRAALN EQMPDNQLQV FVNGAMAQHD  300
ELLSLKGAIA RADIFHLLCG VWASPAERCF LWLGGFRPSE AIKVMLKQVE PLPEGQLMSI  360
YELQQAAKGT EDALSHAMDS LQQSLSDTVA APDVAAAGGF MGHMSLAMNK ISAMEDVVRQ  420
ADGLRQQTLH KLQHMLTIRQ AARCFVAISD YFHRLRALST LWVARPRPEE GPAM

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK106988	0.0	AK106988.1 Oryza sativa Japonica Group cDNA clone:002-120-A05, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015651202.1	0.0	transcription factor TGAL7 isoform X1
Swissprot	Q6H434	0.0	TGAL7_ORYSJ; Transcription factor TGAL7
TrEMBL	A0A0E0LZ88	0.0	A0A0E0LZ88_ORYPU; Uncharacterized protein
STRING	OPUNC09G03170.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2732	36	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	1e-120	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]