PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC09G08970.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 394aa    MW: 42398.7 Da    PI: 8.6542
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC09G08970.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.92.4e-29228287159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rsaed ++++ tYegeHnh+
  OPUNC09G08970.1 228 VKDGYQWRKYGQKVTRDNPSPRAYFRCAFApSCPVKKKVQRSAEDSSLLVATYEGEHNHP 287
                      58***************************99****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081126.98223289IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-28224289IPR003657WRKY domain
SuperFamilySSF1182903.14E-25225289IPR003657WRKY domain
SMARTSM007742.8E-34228288IPR003657WRKY domain
PfamPF031063.9E-24229287IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009617Biological Processresponse to bacterium
GO:0009620Biological Processresponse to fungus
GO:0009751Biological Processresponse to salicylic acid
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MQKTTIISAT RSRRLYVAHQ FPMNQFKCSY TCLFDYSSSR AQQRRAVGWL VAESSSSSMD  60
AAWRGGVGCS PVCLDLCVGL SPVQEPSAAR HELLDRPAGY RGGGDSKAMT NYEAKILEAK  120
VTQMSEENRR LTEVIARLYG SQIARLGLDG SASPPRPVSP QLAGRKRSRE SMETANSCDA  180
NSNRHQSGGA TADADHAESF AAEDGNCRRI KVSRVCRRID PSETSLVVKD GYQWRKYGQK  240
VTRDNPSPRA YFRCAFAPSC PVKKKVQRSA EDSSLLVATY EGEHNHPHPS PRASELPTAA  300
AGAGGSLPCS ISINSSGPTI TLDLTKNGGA VQVVEAADGA AHPPPPPDLK EVCREVASPE  360
FRSALVEQMA SALTSDPKFT GALAAAILQK LPEF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-202272891374WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000250|UniProtKB:Q6QHD1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (By similarity). Induced by pathogen infection (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)) (PubMed:16528562). Accumulates after treatment with benzothiadiazole (BTH) and salicylic acid (SA) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000269|PubMed:16528562}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2981850.0DQ298185.1 Oryza sativa WRKY transcription factor 76 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015610695.10.0WRKY transcription factor WRKY76
SwissprotQ6IEK50.0WRK76_ORYSI; WRKY transcription factor WRKY76
TrEMBLA0A0E0M1A00.0A0A0E0M1A0_ORYPU; Uncharacterized protein
STRINGOPUNC09G08970.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP66603552
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-52WRKY DNA-binding protein 40