PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC09G13210.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 628aa    MW: 70123 Da    PI: 5.8645
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC09G13210.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3429.92.4e-131384191353
                      XXXXXXXXXXXXXXXXXXXXXXX...XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqll.edkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 
                      e+l +rmwkd+++l+r+ker+ +l  + ++a+++++k + +++qa rkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++ra
  OPUNC09G13210.1  38 EDLARRMWKDRIKLRRIKERQDRLAlALQQAELDKSKAKPISDQAMRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDNIRA 131
                      89*******************99651556667************************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT-- CS
             EIN3  94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgls 187
                      WWkekv+fd+ngpaai+ky+++nl+++++ s+   + +++hsl++lqD+tlgSLLs+lmqhc+ppqr++plekg +pPWWP+G+e+ww +lgl+
  OPUNC09G13210.1 132 WWKEKVKFDKNGPAAIAKYESENLAQADAPSS---GIKSQHSLMDLQDATLGSLLSSLMQHCNPPQRKYPLEKGASPPWWPSGNEDWWIALGLP 222
                      *************************9988888...88********************************************************* PP

                      TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.....XXXXXXXXXXX CS
             EIN3 188 kdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.....slrkqspkvtl 276
                      + q  ppykkphdlkk+wkv+vLt vikhmsp++++ir+++r+sk+lqdkm+akes ++l vl++ee+++ ++   +s        + ++   +
  OPUNC09G13210.1 223 RGQI-PPYKKPHDLKKVWKVGVLTGVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREERLVLSIDYGMSevtqhGALEYRNGDMH 315
                      ***9.9****************************************************************999888553554433337777888 PP

                      XXXXXXXXXXXXXXX.XXXXXXXXXX................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.X CS
             EIN3 277 sceqkedvegkkeskikhvqavktta................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgse 338
                      s+++++dv+g +e   ++++ +++++                                g++   krk+++++ ++v+ +ev    +    + ++
  OPUNC09G13210.1 316 SSSNEYDVDGFEEAPLSTSSRDDEQDlspaaqlsdehaptrreranakrpnqvvpkkaGTKEPPKRKRPRHSVTIVE-HEV---QRAVDAP-EH 404
                      8889*****999999899999999889*******************************9*******96666666665.545...4444555.57 PP

                      XXXXXXXXXXXXXXX CS
             EIN3 339 telifadknsisqne 353
                      ++++++d+n+++q e
  OPUNC09G13210.1 405 SRNMIPDMNRLDQVE 419
                      899999999999865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048736.5E-12538288No hitNo description
Gene3DG3DSA:1.10.3180.103.1E-69162293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.35E-60168291IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    Send to blast
MDHLAIIATE LGDSSDFEVE GIQNLTENDV SDEEIEVEDL ARRMWKDRIK LRRIKERQDR  60
LALALQQAEL DKSKAKPISD QAMRKKMSRA QDGILKYMLK LMEVCNARGF VYGIIPDKGK  120
PVSGASDNIR AWWKEKVKFD KNGPAAIAKY ESENLAQADA PSSGIKSQHS LMDLQDATLG  180
SLLSSLMQHC NPPQRKYPLE KGASPPWWPS GNEDWWIALG LPRGQIPPYK KPHDLKKVWK  240
VGVLTGVIKH MSPNFDKIRN HVRKSKCLQD KMTAKESLIW LGVLQREERL VLSIDYGMSE  300
VTQHGALEYR NGDMHSSSNE YDVDGFEEAP LSTSSRDDEQ DLSPAAQLSD EHAPTRRERA  360
NAKRPNQVVP KKAGTKEPPK RKRPRHSVTI VEHEVQRAVD APEHSRNMIP DMNRLDQVEI  420
QDMANQIITS FNEEANTSEA LQHRGNTQEP AHLPADLNYG NAQATIATPV SICMGGQAVP  480
YESSDNSRPK TGNIFPQDSD SGFNNMPSSY QTIPPKQPLP LSRMEHHVVP MGIRTPADNS  540
PYSDQIIGSG NSTSVPGDVQ LIDYPFYGEQ DKFAGSSFAG LPLDYISISS PIPDIDDLLL  600
HDDDLMELGY NASLRLFLSL ILSLGLPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A7e-641682919132ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00649PBMTransfer from LOC_Os09g31400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1087580.0AC108758.2 Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence.
GenBankAK0659790.0AK065979.1 Oryza sativa Japonica Group cDNA clone:J013047J08, full insert sequence.
GenBankAP0149650.0AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612094.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_015612095.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-141EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0E0M2T00.0A0A0E0M2T0_ORYPU; Uncharacterized protein
STRINGOPUNC09G13210.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-144ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]