PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC09G16400.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 197aa    MW: 21458.2 Da    PI: 10.5171
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC09G16400.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1568.9e-18127180457
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                      ++r +r++kNRe+A rsR+RK+a++ +Le +v++L++eN +L+ + e+l+k+v+
  OPUNC09G16400.1 127 DRRKKRMIKNRESAARSRARKQARVNNLESEVEQLKQENNMLRVKYEQLRKTVE 180
                      789************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.0E-12124191IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.001126180IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.2E-16127180No hitNo description
PfamPF001706.5E-16127180IPR004827Basic-leucine zipper domain
CDDcd147072.61E-20128178No hitNo description
SuperFamilySSF579594.44E-13128180No hitNo description
PROSITE patternPS000360131146IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MAMEDDEDMW ANTSSPSASP PRPRGFISTA LSLNSTHLRG LLPSSFVDAA ATPCDASNNN  60
NNGGGGRNAA AMPSFFSSSA SYHHQQHHLP PHAPLDGAIL PARRTTCGFE LDMCTAAAPA  120
GAPAAGDRRK KRMIKNRESA ARSRARKQAR VNNLESEVEQ LKQENNMLRV KYEQLRKTVE  180
VPVPVRRTLQ RVLSAPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8359080.0CT835908.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN083I14, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015611345.14e-92uncharacterized protein LOC9271661
TrEMBLA0A0E0M3Z01e-143A0A0E0M3Z0_ORYPU; Uncharacterized protein
STRINGOPUNC09G16400.11e-144(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97643044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.24e-09basic region/leucine zipper motif 27