PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC10G07810.2
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NF-YA
Protein Properties Length: 153aa    MW: 16895.9 Da    PI: 10.0436
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC10G07810.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA24.31e-07891103758
        CBFB_NFYA  37 pylheSRhkhAlrRpRgsgGrF 58 
                      ++l eSR+k+A+ R+Rg+gGrF
  OPUNC10G07810.2  89 RILVESRQKQAKLRRRGKGGRF 110
                      6899*****************9 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MRRRYSAGRW EERKRGRGKL IYIGDKEGGR TTEGVPSCKS HVDIMGVGES NHVNQSKLDG  60
LGEVSTDLSL ANQEANSVHP KPEHIQPLRI LVESRQKQAK LRRRGKGGRF ISTEHPLEPY  120
VDDQLSKNGG KISPCTSTTS ENSSNVNVFA GDV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015697306.14e-37PREDICTED: nuclear transcription factor Y subunit alpha-like
TrEMBLA0A0E0M7E11e-109A0A0E0M7E1_ORYPU; Uncharacterized protein
STRINGOPUNC10G07810.11e-87(Oryza punctata)