PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC10G08190.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 229aa    MW: 24691.8 Da    PI: 7.2964
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC10G08190.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.61e-101664255
              AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +ykGV +   +grW+  I   +      kr+ +g +gt+eeAa a+++a +++ g
  OPUNC10G08190.1 16 KYKGVAR-TADGRWRGFITNkF-----GKRYGVGDHGTPEEAALAHDRAILAILG 64
                     8****95.559****8877744.....5*********************998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.4E-91675IPR001471AP2/ERF domain
PfamPF008472.0E-71663IPR001471AP2/ERF domain
PROSITE profilePS5103211.8911675IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-91674IPR016177DNA-binding domain
SMARTSM003800.00141681IPR001471AP2/ERF domain
CDDcd000185.50E-151677No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MAGSGAGDGD VHARVKYKGV ARTADGRWRG FITNKFGKRY GVGDHGTPEE AALAHDRAIL  60
AILGAHASPA ALNFRAAFSD TELRFLRGPH APSRRAAGVI AAVMRGAAFD AELERFAARA  120
YDAHTDPELA LDVAAFRLAS RDADALAQPE RDAERAAFVA AARNKVHDAA WLRSYLQRRR  180
LVGATFEDEN RWPPVVPPPV VDVGDGFAGN ELVYLPYGSC HVDEMMITA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0218930.0AC021893.18 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence.
GenBankAP0149660.0AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0M7I81e-162A0A0E0M7I8_ORYPU; Uncharacterized protein
STRINGOPUNC10G08190.11e-162(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP150581718