PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC11G00970.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 300aa    MW: 34019.4 Da    PI: 6.557
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC11G00970.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY56.74.9e-18142206259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnhe 59 
                      +Dg++WrKYGqK +  ++++rsYYrC+ +   gCp++k v++ +  +    k++++ Y g+H+++
  OPUNC11G00970.1 142 NDGHQWRKYGQKWISRAKHSRSYYRCANSkvqGCPATKTVQQMDYSGngtsKLFNVDYYGQHTCR 206
                      8*************************9887889********98765422227899*******995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-21127206IPR003657WRKY domain
PROSITE profilePS5081114.665136183IPR003657WRKY domain
SuperFamilySSF1182903.4E-19137206IPR003657WRKY domain
SMARTSM007745.4E-28141207IPR003657WRKY domain
PfamPF031064.5E-21142206IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MNLPASWLEQ LIEFHWSQSK HVPIQGPVTS DCQVVINMIE HQKALMVELR GMVIPILPSD  60
NEQAKLALQL LGDILSCSDK AISMLELGGD TNKLTNLVGG KRKGDKHSMD NHNLKEEAKE  120
SVHKRRKNAE HTGSTVAQAP HNDGHQWRKY GQKWISRAKH SRSYYRCANS KVQGCPATKT  180
VQQMDYSGNG TSKLFNVDYY GQHTCRGDDI ANPCVVDTAH RSMEPINQTK CNSPTLEHEA  240
HEVQDERFEN LCMVQNMPEY LIEFELERAF EFTVNSPLGS EHLMFDDSIR CEQSPICIWG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1020930.0AK102093.1 Oryza sativa Japonica Group cDNA clone:J033083A06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616437.10.0probable WRKY transcription factor 67
TrEMBLA0A0E0MBR60.0A0A0E0MBR6_ORYPU; Uncharacterized protein
STRINGOPUNC11G00970.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133251529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-18WRKY DNA-binding protein 46