PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC11G00990.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 315aa    MW: 33970.6 Da    PI: 6.5748
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC11G00990.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.64.6e-22125186359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTE..EEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkv..veitYegeHnhe 59 
                      Dgy+WrKYGqK+++g+ +prsYYrCt +   gC +kk v+r+   + +   ++ Y +eH+++
  OPUNC11G00990.1 125 DGYQWRKYGQKQIEGAMYPRSYYRCTNStnqGCLAKKTVQRNGGGGGAarYTVAYISEHTCK 186
                      9************************9888889**********976654116899*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.8E-23109187IPR003657WRKY domain
SuperFamilySSF1182902.22E-21117186IPR003657WRKY domain
SMARTSM007745.6E-30123187IPR003657WRKY domain
PfamPF031066.0E-22125186IPR003657WRKY domain
PROSITE profilePS5081119.52125166IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MEAYCVMVGR ERELVAELCH LLFPSPSPTT PRSHATSTLA GDQCLEPGLT TTTTTVSGGG  60
GRRRGKRVHR DSDNVKLLQA DDDQEALVAD HGDANAKPLP DFTKKSKRKQ PKTTSTMLTT  120
VPDFDGYQWR KYGQKQIEGA MYPRSYYRCT NSTNQGCLAK KTVQRNGGGG GAARYTVAYI  180
SEHTCKSMES SLAPVILDTT VRTNSHHHPP AATAAVAQSP ATSSSSDMIM TSSTTSSSGE  240
TSWSGQHGAY IAADEDCWDT NKYTCGSDGG NSCAEEMELL SGPIRSPVHI AADGNWMDDL  300
LLDISNANIS HFFSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-131251861069OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0149685e-85AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence.
GenBankBX0005005e-85BX000500.4 Oryza sativa chromosome 12, . BAC OSJNBb0027B07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence.
GenBankCP0126205e-85CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616434.11e-129probable WRKY transcription factor 33
TrEMBLA0A0E0MBR80.0A0A0E0MBR8_ORYPU; Uncharacterized protein
STRINGOPUNC11G00990.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.19e-17WRKY DNA-binding protein 70