PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC11G03040.3

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 473aa MW: 52239.6 Da PI: 7.0649

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC11G03040.3	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.9	8e-12	169	197	5	33
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le OPUNC11G03040.3 169 KTMRRLAQNREAARKSRLRKKAYIQQLES 197 6679***********************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	8.887	167	211	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.6E-7	167	205	No hit	No description
SuperFamily	SSF57959	4.25E-7	169	202	No hit	No description
Pfam	PF00170	6.5E-9	169	198	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	172	187	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.0E-29	248	322	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence Send to blast
MRNSVAHETP SVFIILLKLF TTHQSWLLRM GEASSSGHSR QNPHVLGYGF HGTMPTSMPS 60 ANFFEQQGGA TYFGELEEAL MQQVATLRRT QQTATTTSTL HHGDTTHTTD SESSSKNNSN 120 QNGSSDQHGL VGDMAGQFDQ IPQQQQQHKK MATNSPTHSS KTGKALDPKT MRRLAQNREA 180 ARKSRLRKKA YIQQLESSKL KLAQMEQDIH RARSQGLLLG APGGNTSSGA VMFDVDYARW 240 LEEDSRRMAE LHGGLHAHLP DSDLRAIVDD TLTHYDHLFN LKGMAAKADV FHLITGMWAT 300 PAERCFLWMG GFRPSELLKT LIPQLDPLTE QQVVGICNLQ QSSQQAEEAL SQGLDQLHQS 360 LAETVAGGSP LDDANVGSFM GHMAIALGQL SNLEGFVIQA DNLRQQTIHQ MHRILTVRQA 420 ARCFLAIGEY HNRLRALSSL WASRPREILV ADEGNCGELS IAAHPSESQY SAF

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence Send to blast

MRNSVAHETP SVFIILLKLF TTHQSWLLRM GEASSSGHSR QNPHVLGYGF HGTMPTSMPS  60
ANFFEQQGGA TYFGELEEAL MQQVATLRRT QQTATTTSTL HHGDTTHTTD SESSSKNNSN  120
QNGSSDQHGL VGDMAGQFDQ IPQQQQQHKK MATNSPTHSS KTGKALDPKT MRRLAQNREA  180
ARKSRLRKKA YIQQLESSKL KLAQMEQDIH RARSQGLLLG APGGNTSSGA VMFDVDYARW  240
LEEDSRRMAE LHGGLHAHLP DSDLRAIVDD TLTHYDHLFN LKGMAAKADV FHLITGMWAT  300
PAERCFLWMG GFRPSELLKT LIPQLDPLTE QQVVGICNLQ QSSQQAEEAL SQGLDQLHQS  360
LAETVAGGSP LDDANVGSFM GHMAIALGQL SNLEGFVIQA DNLRQQTIHQ MHRILTVRQA  420
ARCFLAIGEY HNRLRALSSL WASRPREILV ADEGNCGELS IAAHPSESQY SAF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK069411	0.0	AK069411.1 Oryza sativa Japonica Group cDNA clone:J023013G15, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015617800.1	0.0	transcription factor TGAL4 isoform X1
Swissprot	Q53Q70	0.0	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A0E0MCJ6	0.0	A0A0E0MCJ6_ORYPU; Uncharacterized protein
STRING	OPUNC11G03040.1	0.0	(Oryza punctata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-135	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]