PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC11G15620.2

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

C2H2

Protein Properties

Length: 1018aa MW: 113040 Da PI: 5.363

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC11G15620.2	genome	OGE	View CDS

Signature Domain? help Back to Top

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.25.40.10	2.1E-8	127	201	IPR011990	Tetratricopeptide-like helical domain
SuperFamily	SSF48452	2.3E-8	131	202	IPR011990	Tetratricopeptide-like helical domain
PROSITE profile	PS50293	12.158	137	204	IPR013026	Tetratricopeptide repeat-containing domain
Pfam	PF04780	1.8E-16	254	349	IPR006865	Domain of unknown function DUF629

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 1018 aa Download sequence Send to blast
MCTAPPHFSP RPPPHATDPP IHHTAPPTLS SSAAWHFHKH LACTSLAATS SPRAASSAGS 60 ASSSRPLRAT GLGDSPWDAG NKTNPSNMDW NGARAHPGFR ARVEALTGPL PAQQDGVDVK 120 EERLHEAVKL TVDFHSPLAY HVLGHVRAAL GEDELALDSL DYASKLAPGD LDIAFTLAKR 180 YAAREQFDLA AEECQRALSL GDADLVDPEL HAVFEFRDLK SSVESRISMA KQPLRDLLDD 240 ALSKIAVLMA CDCWNGMSEE KRRSFLTVSI EEMKAPYRGS AKRTLTSAVD FAKDNGIWIC 300 WLCPQCEKRF PTSESFLSHV EVESFPKLKA SLLFVPKRIS KEQAELIESW TVPSDVSPKE 360 QAEREEILSK IKSTLQHLKD QKALSVDLLD NLVKLTKNWI GETTAVPQHH SCITKLHPVV 420 LRVLDLLISG LRTGDAKQDD CDQFDAPFVP SIVIEENMLR ITDGSSNQDA LFSWLCRHSR 480 QDAVTSWSSI RQACLDKGTH ALKKLNECTA ALIEKVQLKS GLIETQMGGA YFCEKAKIDV 540 EIMQLDAKVD NLKKNLVEVC ICDYREIILP AMKDFLWAKL CNDPPKGVSS SEDDKAADAS 600 IENRDPVQED INEGFNINSP ESVLQEDDGK ATEDNLQGGD STVPHDNGVE ELPGDSKVSR 660 SGKKLELPPR ANTSTLGSTE TPMEKANKTS SPSDYSGSNE GSTNIPSNGV TGSAYPNSEN 720 DLKSLFSALL SLWHLRPFSD KYMKKAPLYP HFGVSGEDRV CMLCYLFHTF NAFSDKSDSR 780 ANNRLNCLRP SFIKVLEEAN VSLKEETNFA VKYIEIVLNM VHTSETAICI NNNSENILYK 840 TTLFSSCPKH RCLSHEFFGM HKNATESTYF LNVGASELQN IEMKTFADVI KSVDKQFHCN 900 TESNAHNHPP RYFTTAFSYP SENDSHFVSG LLVSIAAPLD INPVYEGLHS ECKYTMVSAV 960 FRAEGRDICF AREEDKWLEF DSWEKVLEEY SRSSFCPQII FFERIDPVSE AMITEVTV

Sequence ? help Back to Top

Protein Sequence Length: 1018 aa Download sequence Send to blast

MCTAPPHFSP RPPPHATDPP IHHTAPPTLS SSAAWHFHKH LACTSLAATS SPRAASSAGS  60
ASSSRPLRAT GLGDSPWDAG NKTNPSNMDW NGARAHPGFR ARVEALTGPL PAQQDGVDVK  120
EERLHEAVKL TVDFHSPLAY HVLGHVRAAL GEDELALDSL DYASKLAPGD LDIAFTLAKR  180
YAAREQFDLA AEECQRALSL GDADLVDPEL HAVFEFRDLK SSVESRISMA KQPLRDLLDD  240
ALSKIAVLMA CDCWNGMSEE KRRSFLTVSI EEMKAPYRGS AKRTLTSAVD FAKDNGIWIC  300
WLCPQCEKRF PTSESFLSHV EVESFPKLKA SLLFVPKRIS KEQAELIESW TVPSDVSPKE  360
QAEREEILSK IKSTLQHLKD QKALSVDLLD NLVKLTKNWI GETTAVPQHH SCITKLHPVV  420
LRVLDLLISG LRTGDAKQDD CDQFDAPFVP SIVIEENMLR ITDGSSNQDA LFSWLCRHSR  480
QDAVTSWSSI RQACLDKGTH ALKKLNECTA ALIEKVQLKS GLIETQMGGA YFCEKAKIDV  540
EIMQLDAKVD NLKKNLVEVC ICDYREIILP AMKDFLWAKL CNDPPKGVSS SEDDKAADAS  600
IENRDPVQED INEGFNINSP ESVLQEDDGK ATEDNLQGGD STVPHDNGVE ELPGDSKVSR  660
SGKKLELPPR ANTSTLGSTE TPMEKANKTS SPSDYSGSNE GSTNIPSNGV TGSAYPNSEN  720
DLKSLFSALL SLWHLRPFSD KYMKKAPLYP HFGVSGEDRV CMLCYLFHTF NAFSDKSDSR  780
ANNRLNCLRP SFIKVLEEAN VSLKEETNFA VKYIEIVLNM VHTSETAICI NNNSENILYK  840
TTLFSSCPKH RCLSHEFFGM HKNATESTYF LNVGASELQN IEMKTFADVI KSVDKQFHCN  900
TESNAHNHPP RYFTTAFSYP SENDSHFVSG LLVSIAAPLD INPVYEGLHS ECKYTMVSAV  960
FRAEGRDICF AREEDKWLEF DSWEKVLEEY SRSSFCPQII FFERIDPVSE AMITEVTV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK101994	0.0	AK101994.1 Oryza sativa Japonica Group cDNA clone:J033079I07, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015615798.1	0.0	uncharacterized protein LOC4350852
TrEMBL	A0A0E0MGX2	0.0	A0A0E0MGX2_ORYPU; Uncharacterized protein
STRING	OPUNC11G15620.1	0.0	(Oryza punctata)