PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC11G19440.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 156aa    MW: 17263.9 Da    PI: 4.3967
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC11G19440.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.12.7e-211470258
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
                     dDgy+WrKYGqK++ g+   ++Y+rCt++   gC ++k+++r + dp ++++ Y+g H++
  OPUNC11G19440.1 14 DDGYSWRKYGQKDILGA---KGYFRCTHRntqGCVATKQIQRRDADPLLFDVEYHGAHTC 70
                     8**************97...58******98889*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.581868IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.3E-211072IPR003657WRKY domain
SuperFamilySSF1182906.67E-201172IPR003657WRKY domain
SMARTSM007741.5E-301372IPR003657WRKY domain
PfamPF031064.2E-201470IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MKRKTQVRLS SVQDDGYSWR KYGQKDILGA KGYFRCTHRN TQGCVATKQI QRRDADPLLF  60
DVEYHGAHTC GQREASLNEQ VIWWSRSSAS STEQSQSSST ITYTAAGSVE DDEEEGGVTS  120
AANFLSMDDM LDLGGGDVID MDFPSFDFDA IEALLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-161470968OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969356.13e-33probable WRKY transcription factor 53
TrEMBLA0A0E0MI851e-112A0A0E0MI85_ORYPU; Uncharacterized protein
STRINGOPUNC11G19440.11e-113(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.24e-25WRKY family protein