PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC12G00970.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 277aa    MW: 31391.4 Da    PI: 6.3676
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC12G00970.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY581.9e-18119182258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnh 58 
                      +Dg++WrKYGqK +  ++++rsYYrC+ +   gCp++k v++ ++ +    k++++ Y g+H +
  OPUNC12G00970.1 119 NDGHQWRKYGQKWISRAKHSRSYYRCANSkmqGCPATKTVQQMDSSGngtsKLFNVDYYGQHIC 182
                      8*************************9877789********99876522226899*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-21104183IPR003657WRKY domain
PROSITE profilePS5081114.55113160IPR003657WRKY domain
SuperFamilySSF1182904.84E-19114183IPR003657WRKY domain
SMARTSM007744.3E-28118184IPR003657WRKY domain
PfamPF031064.2E-21119182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MSLFRDRDCQ VVINMIEHQK ALMVELRGMV IPILPSDNEQ AKLALQLLGD ILSCSDKAIS  60
MLELGGDTNK LTNIVGGKRK GDKHSMDNHN LEEEAKESVN KRRKNAEHTG STVAQAPHND  120
GHQWRKYGQK WISRAKHSRS YYRCANSKMQ GCPATKTVQQ MDSSGNGTSK LFNVDYYGQH  180
ICRGDGIANP CVVDTAYHSM EPINQTKCNS PTLEHEAHEV QDERFENLCM LQNMPEYLIE  240
FELERAFEFT VNSPLGSEHL MFDDSIRCEQ SPICIWG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1020930.0AK102093.1 Oryza sativa Japonica Group cDNA clone:J033083A06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616437.10.0probable WRKY transcription factor 67
TrEMBLA0A0E0MIX60.0A0A0E0MIX6_ORYPU; Uncharacterized protein
STRINGOPUNC12G00970.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133251529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.14e-18WRKY DNA-binding protein 46