PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC12G16360.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 260aa    MW: 27719.5 Da    PI: 5.0293
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC12G16360.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1491.3e-15119177462
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                       kr+rr+ +NRe+A+rsR+RK+a +  Le  v +L +eN +L+k+l  +++++++ ++e
  OPUNC12G16360.1 119 AKRTRRMLSNRESAKRSRKRKQAHLNDLESQVSQLRSENASLQKRLVDMTQKYKQSTTE 177
                      69*****************************************8888888888776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-16116180IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-12118172No hitNo description
PROSITE profilePS5021711.599118173IPR004827Basic-leucine zipper domain
PfamPF001702.5E-13119173IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.53E-11120171No hitNo description
CDDcd147021.26E-19121171No hitNo description
PROSITE patternPS000360123138IPR004827Basic-leucine zipper domain
PfamPF124989.7E-15187242IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MKRGGAGDGA AEVNCGGGGD SGAYAAVLKT KLDLYCAAVA KSMEAKSQES SLGYLNLQAS  60
DTSQLVSQAS FNGYGSTRVT NSNAIHDDDD QGKLANSGTS KEQLDDDGDL EENTDPVNAK  120
RTRRMLSNRE SAKRSRKRKQ AHLNDLESQV SQLRSENASL QKRLVDMTQK YKQSTTENGN  180
LRDDVNTMRR KVNIAEEAVR RVTGIGLQLF TTSEMPASSM PFSSGVSDAA SAAAAALVED  240
DWTNCSLPDE AIPAPSAAMA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132139KRSRKRKQ
2134139SRKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8376610.0CT837661.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063K17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015620821.11e-150light-inducible protein CPRF2 isoform X2
TrEMBLA0A0E0MPC80.0A0A0E0MPC8_ORYPU; Uncharacterized protein
STRINGOPUNC12G16360.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75952943
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.29e-29bZIP family protein