PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI02G07030.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 170aa    MW: 19291.7 Da    PI: 6.5184
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI02G07030.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.72.1e-1274121552
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                      ++ rr+ +NRe+ArrsR RK+ +++eL   v eL   N++L  el+++
  ORUFI02G07030.1  74 RKKRRLVSNRESARRSRVRKQRRLDELSSQVSELRDTNQRLLVELNHM 121
                      78899************************************9887764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.9E-1067121No hitNo description
SMARTSM003383.9E-970134IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.13972135IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-1074125No hitNo description
PfamPF001702.1E-974120IPR004827Basic-leucine zipper domain
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MQHDAISNIA YHPSMDFTSF FLPQTDAYSH DLSALLDMAV VDPYISCNGS SITMIPVTED  60
EANAQPMNHG NDERKKRRLV SNRESARRSR VRKQRRLDEL SSQVSELRDT NQRLLVELNH  120
MISKHARIVR ENSQLREEAS DLQRKLSEMK MEDAEVAAAA AAAPRTLEVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18692RRSRVRK
28693RRSRVRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0057850.0AP005785.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0453H10.
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
GenBankBT1293470.0BT129347.1 Oryza sativa clone RRlibA00066 mRNA sequence.
GenBankBT1293890.0BT129389.1 Oryza sativa clone RRlibA00076 mRNA sequence.
GenBankCU4069130.0CU406913.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C002J11, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015624742.11e-122basic leucine zipper 43
TrEMBLA0A0E0NB211e-121A0A0E0NB21_ORYRU; Uncharacterized protein
TrEMBLQ0E3661e-120Q0E366_ORYSJ; Os02g0191600 protein
TrEMBLQ69M021e-121Q69M02_ORYSJ; Uncharacterized protein
STRINGORUFI02G07030.11e-122(Oryza rufipogon)
STRINGOS02T0191600-001e-121(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127422735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.11e-12basic leucine-zipper 42