PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ORUFI03G16170.1

Organism

Oryza rufipogon

Taxonomic ID

4529

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 53aa MW: 6419.36 Da PI: 11.0561

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ORUFI03G16170.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.5	8.3e-15	1	37	10	46
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 ++kNRe+A rsR+RK+a++ eLe+k+ Le+eNk+L+ ORUFI03G16170.1 1 MIKNRESAARSRARKQAYTNELENKISRLEEENKRLR 37 68**********************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57959	3.56E-11	1	38	No hit	No description
SMART	SM00338	0.0044	1	47	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.7E-12	1	37	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.4E-13	1	38	No hit	No description
PROSITE profile	PS50217	9.806	1	37	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 53 aa Download sequence Send to blast
MIKNRESAAR SRARKQAYTN ELENKISRLE EENKRLRMHK VSKPVFVHHF QEP

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	FP095124	2e-36	FP095124.1 Phyllostachys edulis cDNA clone: bphylf025g11, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015632165.1	2e-20	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_015689874.1	1e-20	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2, partial
Swissprot	Q9LES3	3e-14	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A0E0NUD4	8e-30	A0A0E0NUD4_ORYRU; Uncharacterized protein
STRING	ORUFI03G16170.1	1e-30	(Oryza rufipogon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4441	33	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-16	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]