 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORUFI05G04010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GATA |
| Protein Properties |
Length: 150aa MW: 15882.5 Da PI: 7.8651 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORUFI05G04010.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 27.4 | 4.8e-09 | 27 | 46 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20
C+ Cg+t+Tp+WR gp g++
ORUFI05G04010.1 27 CVECGATTTPMWRGGPTGPR 46
******************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 150 aa
Download sequence Send
to blast |
MGSSDQKVIG IAAAAAAAAE EAGRRCCVEC GATTTPMWRG GPTGPRISEI VISRSKSDCE 60
GAMEGNCVPL KRLVQQVDFL LSSTGITESC QCVAVSCANQ MGLQKAANVL LFLVPIRVLT 120
MENNSCDILH IIRIIGRGCG IESKTRIIDR
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC087551 | 1e-130 | AC087551.3 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone P0431G05, complete sequence. |
| GenBank | AP014961 | 1e-130 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
