PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI06G23140.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 135aa    MW: 13681.2 Da    PI: 9.4338
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI06G23140.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.41.2e-0689126444
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                       +r++ + +NRe+A   R RK+  ++ L+  v+ L  eN  
  ORUFI06G23140.1  89 KRRAKMMLSNRESA---RMRKQRHLDDLTAQVAHLHRENVH 126
                      57899999******...79********************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-490126No hitNo description
SuperFamilySSF579595.62E-690130No hitNo description
CDDcd147024.34E-1091135No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MGRAGEVGAT WADVSGGGHS WVAGAVGLRA SSGDAMAVHL PVDWLRESGE RDVGGAGGGG  60
GGGGGGGGGG GGRASSSAVE EELRALMEKR RAKMMLSNRE SARMRKQRHL DDLTAQVAHL  120
HRENVHVATA LGLTT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0035411e-109AP003541.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0530H05.
GenBankAP0047371e-109AP004737.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21.
GenBankAP0149621e-109AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0Q0E02e-85A0A0E0Q0E0_ORYRU; Uncharacterized protein
STRINGORUFI06G23140.13e-86(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44593367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.16e-16G-box binding factor 6