PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI07G07050.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 290aa    MW: 30601.5 Da    PI: 7.7034
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI07G07050.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_178.77e-25167229163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+eL++eN+aL++el++lkk ++ +++e+
  ORUFI07G07050.1 167 ERELKRERRKQSNRESARRSRLRKQQECEELARKVAELTTENSALRSELDQLKKACEDMEAEN 229
                      89*********************************************************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.9E-835144No hitNo description
Gene3DG3DSA:1.20.5.1706.4E-18166226No hitNo description
PfamPF001702.9E-22167229IPR004827Basic-leucine zipper domain
SMARTSM003383.4E-22167231IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.553169232IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-12170225No hitNo description
CDDcd147024.08E-20172222No hitNo description
PROSITE patternPS000360174189IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MEGRHVGPKP PEPPAAAAAV AAGKGKGAAA SPEKGSSAAP SGDDASRSGD SGSEESSDTR  60
DDDTDHKDSS APKKRKSGNT SAEGEPSQAT LVPYAAVESP YPLKGRSASK LPVSAPGRAA  120
LPNATPNLNI GIDLWSTPPA LAVPAGQGEA SPGLALARRD GVAHLDEREL KRERRKQSNR  180
ESARRSRLRK QQECEELARK VAELTTENSA LRSELDQLKK ACEDMEAENT RLMGDKAQYK  240
GPTVTTTLGM SIDSSKTQHH DDEGQLHKNT NNNSNGNYVG GSHKPEANSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183189RRSRLRK
2183190RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2891790.0AK289179.1 Oryza sativa Japonica Group cDNA, clone: J100028J17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015644731.11e-159DNA-binding protein EMBP-1
SwissprotP250328e-55EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A0E0Q5J70.0A0A0E0Q5J7_ORYRU; Uncharacterized protein
STRINGORUFI07G07050.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.18e-24basic region/leucine zipper transcription factor 16