PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ORUFI07G14800.1

Organism

Oryza rufipogon

Taxonomic ID

4529

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

MYB_related

Protein Properties

Length: 130aa MW: 13910.3 Da PI: 7.967

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ORUFI07G14800.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.6	1.8e-10	90	121	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd+ l+ +++++G+g+W++++ g ORUFI07G14800.1 90 KGPWTPEEDLMLASYIQEHGSGNWRAVPTNTG 121 79************************998665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	4.79E-8	87	119	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.5E-11	88	121	IPR009057	Homeodomain-like
PROSITE profile	PS50090	6.899	89	116	IPR017877	Myb-like domain
Pfam	PF00249	1.5E-9	90	121	IPR001005	SANT/Myb domain
CDD	cd00167	2.12E-6	92	122	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence Send to blast
MPDQRRGTTA LLPTARHGPA ASDRHHSASA ARRDAAATRP ATSVAAANTL VSSSLIEIES 60 THTPPTTGRP PRTGEQDGEA AVLRQGWVKK GPWTPEEDLM LASYIQEHGS GNWRAVPTNT 120 GGIIWSDHSW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK066025	0.0	AK066025.1 Oryza sativa Japonica Group cDNA clone:J013044E03, full insert sequence.
GenBank	AP003849	0.0	AP003849.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1753_E03.
GenBank	AP005465	0.0	AP005465.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1136_F08.
GenBank	AP014963	0.0	AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015647841.1	1e-81	transcription factor MYB101 isoform X2
Refseq	XP_015647842.1	1e-81	transcription factor MYB101 isoform X2
Refseq	XP_015647843.1	1e-81	transcription factor MYB101 isoform X2
Refseq	XP_015647844.1	1e-81	transcription factor MYB101 isoform X2
TrEMBL	A0A0E0Q8B0	9e-88	A0A0E0Q8B0_ORYRU; Uncharacterized protein
STRING	ORUFI07G14800.1	2e-88	(Oryza rufipogon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP40475	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28910.1	8e-17	myb domain protein 30