PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI07G27710.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 593aa    MW: 65176.9 Da    PI: 5.1417
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI07G27710.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3501.63.8e-153814691354
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                      eel++rmw+d++++krlke ++++ +++++a     g +++++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+gasd+
  ORUFI07G27710.1  81 EELERRMWRDRVRHKRLKELQQSRAGRESRAgdagGGGRQQRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDN 174
                      8**********************99999988888888899****************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHH CS
             EIN3  91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgel 184
                      Lr+WWkekv+fdrngpaai+kyqa+n++++ + +   ++ + +hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G+e+ww+e+
  ORUFI07G27710.1 175 LRSWWKEKVRFDRNGPAAIAKYQADNAVPGCDGDAGGAAPAGPHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAWWPEA 268
                      ********************************999888******************************************************** PP

                      T--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXXXXXXXX CS
             EIN3 185 glskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ssslrkqspkvtl 276
                      g++k+ g+ppykkphdlkkawkv+vLtavikhmsp+++++r+l+rqsk+lqdkm+ake  ++l+vl+qee+++ ++++   ++    ++ ++++
  ORUFI07G27710.1 269 GVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKLHPGalPPP--LSAASFNA 360
                      ******************************************************************************965444..478899** PP

                      XXXXXXXXXXXXXXX.XXXXXXXXXX................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.X CS
             EIN3 277 sceqkedvegkkeskikhvqavktta................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgse 338
                      s + ++dveg +  +  + + +k+++                                ++++++kr  +p+   +  s+  ++tc + q+++s+
  ORUFI07G27710.1 361 SVSGEYDVEGVDGDEAGNNNLQKAQNdatafmdltttmdaalsnnkflimplmkeeaiDVDFIQKRS-EPELMLSSDSHARVYTCGNVQCPHSN 453
                      *********5555554555555555556899***********************************9.55555555666678************ PP

                      XXXXXXXXXXXXXXXX CS
             EIN3 339 telifadknsisqney 354
                      ++l+f d+n+++ ++y
  ORUFI07G27710.1 454 YALGFLDRNERNAHQY 469
                      **************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048736.8E-12981338No hitNo description
Gene3DG3DSA:1.10.3180.101.2E-70217346IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.27E-58218341IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    Send to blast
MMGAAVTMVD RRMAFAAEAD VDSKADFGFF GGECFVGEGD LVNPAPPPPQ QQQVHEGGFA  60
AEDESDGDDD DDDDDDVDDI EELERRMWRD RVRHKRLKEL QQSRAGRESR AGDAGGGGRQ  120
QRQSQEQARR KKMSRAQDGI LKYMLKMMEV CNAQGFVYGI IPEKGKPVSG ASDNLRSWWK  180
EKVRFDRNGP AAIAKYQADN AVPGCDGDAG GAAPAGPHSL HELQDTTLGS LLSALMQHCD  240
PPQRRFPLEK GVPPPWWPEG SEAWWPEAGV PKELGPPPYK KPHDLKKAWK VAVLTAVIKH  300
MSPDVDKVRR LVRQSKCLQD KMTAKEIVTW LAVLKQEEDL YLKLHPGALP PPLSAASFNA  360
SVSGEYDVEG VDGDEAGNNN LQKAQNDATA FMDLTTTMDA ALSNNKFLIM PLMKEEAIDV  420
DFIQKRSEPE LMLSSDSHAR VYTCGNVQCP HSNYALGFLD RNERNAHQYA CKHNAAAAAA  480
ESKPPPPHIF EPLGSFDFDL PVDGQRCLAG LMTMYDNDVA AATQMHHHHH QQQQANFFIR  540
DDAPFGGDVA ATAAAAPEFR FSSNFNVSGG GAVDYGGAMQ QPPAKYAGSN WFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-702153461132Protein ETHYLENE INSENSITIVE 3
4zds_B4e-702153461132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0749720.0AB074972.2 Oryza sativa Japonica Group OsEIL2 mRNA for ethylene-insensitive-3-like protein, complete cds.
GenBankAP0038180.0AP003818.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1200_C08.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646574.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3L90.0EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2
TrEMBLA0A0E0QCX40.0A0A0E0QCX4_ORYRU; Uncharacterized protein
STRINGORUFI07G27710.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-137ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]