PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI08G08020.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 230aa    MW: 24889.8 Da    PI: 7.7072
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI08G08020.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.32.8e-12120180363
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e +r rr+ +NRe+ArrsR RK+ ++ eL   v+ L + N++L +el++    +a ++ e+
  ORUFI08G08020.1 120 EERRRRRMVSNRESARRSRMRKQRQLSELWAQVEHLRGANRRLLDELNRALRGCADVRREN 180
                      67899*******************************************9888887776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-12118182IPR004827Basic-leucine zipper domain
PfamPF001701.6E-9119178IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.772120183IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-10122170No hitNo description
Gene3DG3DSA:1.20.5.1702.1E-9122194No hitNo description
PROSITE patternPS000360125140IPR004827Basic-leucine zipper domain
CDDcd147021.47E-14127171No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MYHHHHGGHG EVASLHLLSP PNPPFFGAAA HHHHHHHGLI NMALPPQAYF VPPPPPPPFQ  60
EATAALAAGD DATAALAVFE LERILEEAAA AGGGGGNGSP SSGSDGCCYG LQGVAPAAEE  120
ERRRRRMVSN RESARRSRMR KQRQLSELWA QVEHLRGANR RLLDELNRAL RGCADVRREN  180
SRLRDEKAEL AGKLQLLLPR QPAPEKNAAD DQSSCSSEPC KNSTTTTAAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134141RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0043760.0AP004376.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0481F05.
GenBankAP0045570.0AP004557.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0028A08.
GenBankAP0149640.0AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015649077.11e-165bZIP transcription factor RISBZ3-like
TrEMBLA0A0E0QG111e-165A0A0E0QG11_ORYRU; Uncharacterized protein
STRINGORUFI08G08020.11e-166(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38800.13e-10basic leucine-zipper 43