PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI11G02320.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 769aa    MW: 83159.5 Da    PI: 6.0912
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI11G02320.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM392.4e-1260570229127
              NAM  29 eleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkg 116
                      ++e++i ++d+y +eP+dL  k     +   e+    fF++ ++++ +++rk+r++ +g+W  + + k v++k g +vg  + + f     ++g
  ORUFI11G02320.1 605 DTEKFICRADVYGSEPSDLAgKfapvpR--CEKGGRLFFTSCKRHKGSSTRKERTAGDGTWVRQNS-KGVKNKAGVKVGETQNFRFK----KDG 691
                      44467999***********843454222..2445779999999999****************8866.889999*************7....789 PP

              NAM 117 ektdWvmheyr 127
                      + tdW+m+e +
  ORUFI11G02320.1 692 SYTDWLMEEHH 702
                      99*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF534743.13E-3610319IPR029058Alpha/Beta hydrolase fold
Gene3DG3DSA:3.40.50.18202.1E-5025318IPR029058Alpha/Beta hydrolase fold
PfamPF078592.5E-3692315IPR013094Alpha/beta hydrolase fold-3
Gene3DG3DSA:3.40.50.18204.1E-44338606IPR029058Alpha/Beta hydrolase fold
SuperFamilySSF534746.63E-30363606IPR029058Alpha/Beta hydrolase fold
PfamPF078599.4E-29438611IPR013094Alpha/beta hydrolase fold-3
PROSITE profilePS5100514.051574723IPR003441NAC domain
SuperFamilySSF1019416.02E-13608723IPR003441NAC domain
PfamPF023652.3E-4629702IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0016787Molecular Functionhydrolase activity
Sequence ? help Back to Top
Protein Sequence    Length: 769 aa     Download sequence    Send to blast
MPSTTTAPET DPSKTVVEEV TGWLRLYSDG TVERLTPPDA EPFTVIVPPY TEPRNGVTVH  60
DVTTARGVDV RLYLPAEPPA AAPRPRRRRP LLLHLHGGGF CLSRPSWALY HNFYAPLAAK  120
LDVAGIVSVF LPLAPEYRLP AAIDAGHAAL LWLRDVACGD EGNLDPAVER LRDEADFSRV  180
FLIGDSSGGN LDDGAGADLH AVRLAGGVLL NPGFAREEKS RSELENPPSL FLTEDMVDKL  240
LALGVPLGMN KDSPYTSPSL VAEAVARLHM PPMLLVVAEK DLLHDPQVEY GEAMARVGKT  300
VETVVSRGAV AHVFYLNFFA VDIACSFHIF TATYSIIWPA AAMATLPQMA ATKERQEAAN  360
PTTTTRTLVE SVTNWIRVYS DGSVDRLGPP EAAAFMVLVP PYDDPRDGVT VHDVATDHGV  420
DVRLYLTTTA PARRRPVLVH FHGGGFCLSH AAWSLYHRFY ARLTVDLDVA GIVSVVLPLA  480
PEHRLPAAID AGHAALLWLR DVASGGSDTI AHPAVERLCG AADFSRVFLI GDSAGGVLVH  540
NVAARAGEAG AEALDPIRLA GGVQLHPGFI LPEKSPSELE NPPTPFMTQE TVDKFVVLAL  600
PPTKDTEKFI CRADVYGSEP SDLAGKFAPV PRCEKGGRLF FTSCKRHKGS STRKERTAGD  660
GTWVRQNSKG VKNKAGVKVG ETQNFRFKKD GSYTDWLMEE HHCCRQQAVA GDEEPVICRM  720
YVSPRAPPDS AARQESAAFV QQQPAPQVSE PPCDKKKRDD VAEEAPAAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2o7r_A6e-227061253296CXE carboxylesterase
2o7v_A6e-227061253296CXE carboxylesterase
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1235270.0AC123527.3 Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence.
GenBankAP0149670.0AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence.
GenBankFQ3780340.0FQ378034.1 Oryza glaberrima chromosome 11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615813.10.0probable carboxylesterase 17
TrEMBLA0A0E0R3X70.0A0A0E0R3X7_ORYRU; Uncharacterized protein
STRINGORUFI11G02320.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123478