PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI12G03900.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 195aa    MW: 21200.9 Da    PI: 6.9499
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI12G03900.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-10117179163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kke e+  +e+ +lk  +
  ORUFI12G03900.1 117 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSTQNESMKKERETVMQEYLSLKETN 179
                      89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-6114182No hitNo description
PfamPF001708.0E-10117180IPR004827Basic-leucine zipper domain
SMARTSM003381.9E-12117181IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.14119182IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.57E-6121177No hitNo description
CDDcd147026.85E-11122172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MSDDHSGGGG EQRQCRRGFA VDVVELGAAL ALADMAGAAV KPAMQLQLQP TAAQEEDEEM  60
ATTRLSLQLG NNVGSIIQSS SCSSSGSSAG LPAPPPPPPP PATAYGTKPL HMLTEEEKEA  120
KRLRRVLANR ESARQTILRR QAIRDELARK VADLSTQNES MKKERETVMQ EYLSLKETNK  180
QLKEQAQHHL SLSLF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankOSU042970.0U04297.1 Oryza sativa Nipponbare bZIP DNA-binding factor (osZIP-2b) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006663833.11e-82PREDICTED: G-box-binding factor 1-like
RefseqXP_025877668.13e-79uncharacterized protein LOC4351546
TrEMBLA0A0E0RE031e-139A0A0E0RE03_ORYRU; Uncharacterized protein
STRINGORUFI12G03900.11e-140(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.18e-16bZIP family protein