PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI12G07600.2
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 445aa    MW: 48046.3 Da    PI: 8.5667
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI12G07600.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.98.2e-22227289163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN++L++e+++++ke+++l s++
  ORUFI12G07600.2 227 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRAEVLKQENTSLRDEVNRIRKEYDELLSKN 289
                      89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077775.1E-7132IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.1E-3976201No hitNo description
Gene3DG3DSA:1.20.5.1706.4E-17221286No hitNo description
PfamPF001701.0E-20227289IPR004827Basic-leucine zipper domain
SMARTSM003381.7E-21227291IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.415229292IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.69E-11230286No hitNo description
CDDcd147021.25E-22232283No hitNo description
PROSITE patternPS000360234249IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MWGAQPMIPP YGTPPPPYVM YPPGVYAHPS MPPGAHPFTP YAMASPNGNA DPTGTTTTAA  60
AAAAGETDGK SSEGKEKSPI KRSKGSLGSL NMITGKNSTE HGKTSGASAN GAISQSGESG  120
SESSSEGSEA NSQNDSHHKE SGQEQDGEVR SSQNGVSRSP SQAKLNQTMA IMPMTSSGPV  180
PAPTTNLNIG MDYWANTASS TPAIHGKATP TAAPGSMVPG EQWVQDEREL KRQRRKQSNR  240
ESARRSRLRK QAECEELAQR AEVLKQENTS LRDEVNRIRK EYDELLSKNS SLKEKLEDKQ  300
HKTDEAGVDN KLQHSGMDLW QNSCWERLAK TSPRTGLPLK LVQVLQLLEQ GGQGKLTLFL  360
LIFWCFTLVI VIVWLEWAVG TIVALGSLMR SSNMSGAGME CLDRNSITWL SGMVAVDSIL  420
SLGIRKVVLC GIFSCTILMS MTKVK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1243249RRSRLRK
2243250RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankOSU042950.0U04295.1 Oryza sativa Nipponbare bZIP DNA-binding factor (osZIP-1a) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015619717.10.0bZIP transcription factor 68 isoform X1
RefseqXP_015619718.10.0bZIP transcription factor 68 isoform X2
SwissprotB6E1071e-172BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLA0A0E0RFC60.0A0A0E0RFC6_ORYRU; Uncharacterized protein
STRINGORUFI12G07600.20.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-81basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]