 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORUFI12G18110.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Dof |
| Protein Properties |
Length: 260aa MW: 26381 Da PI: 6.8835 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORUFI12G18110.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 38.7 | 2.1e-12 | 98 | 119 | 5 | 26 |
zf-Dof 5 alkcprCdstntkfCyynnysl 26
+l+cprCdstntkfCy+nnysl
ORUFI12G18110.1 98 TLRCPRCDSTNTKFCYFNNYSL 119
679*****************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MVFSSLPIFL DPPNWTQMQQ QSLQCLIGGG GGSDHHHLMP PPSGLAPLPS AAGAADTAAS 60
APAGGSSAAA ATQQQRPAVV SMSERARLAR VPLPEPGTLR CPRCDSTNTK FCYFNNYSLR 120
ATSARLXGLP SSAAAAAALE ASLEGYHHHG HGHGHQLPFL QPPPFLQQGL HGYHFADGDV 180
IAGGGALADG GFPRGVASGL LAQLASVKME EHGTNNGGGG GVGGFVGAHE QYWHGGNGGG 240
GGWPAEFLSG FSSSSSGNVL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL731784 | 0.0 | AL731784.3 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
| GenBank | AP014968 | 0.0 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012620 | 0.0 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |
