PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_02538A
Organism
Oropetium thomaeum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family EIL
Protein Properties Length: 276aa    MW: 29969.2 Da    PI: 4.4096
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_02538AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3118.11.5e-3635143299
                                XXXXXXXXXXXXXXXXXXXXXX..XXXXX..............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                       EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa.............tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGf 72 
                                +lk+rmwkdqmll +l++r      +  ++              ++++ +++  + rrk+m raQDg+L++Mlk+me+cna+Gf
  Oropetium_20150105_02538A  35 DLKRRMWKDQMLLSKLEGRAGAVRSS--VTgpssrplapaaarQQQQEAEDPDVRCRRKAMLRAQDGVLRHMLKMMEACNARGF 116
                                9*****************99874322..222346677775433333333478889***************************** PP

                                XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                       EIN3  73 vYgiipekgkpvegasdsLraWWkekv 99 
                                vYg i+e g+p++g+sdsLr+WWk+++
  Oropetium_20150105_02538A 117 VYGVIDEAGEPMSGSSDSLRGWWKDNI 143
                                *************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.7E-3735143No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MEHDVAGGGG AGDLEAAPEP EQDELSDSEA IEISDLKRRM WKDQMLLSKL EGRAGAVRSS  60
VTGPSSRPLA PAAARQQQQE AEDPDVRCRR KAMLRAQDGV LRHMLKMMEA CNARGFVYGV  120
IDEAGEPMSG SSDSLRGWWK DNITPLXXXX XXXXXXMEGV VVAGRTQDKR KRELISSPSR  180
DSNIGVLPPE FAGFATVDDS QCPVVELVKL YNSCVPPEHA GLHLGYDDAA AELFPGELDF  240
FCGAAIAEEG PPDVPFDLIR SFSGVDDVLR TMHDQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapOropetium_20150105_02538A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004955019.14e-57ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A3L6RQ532e-58A0A3L6RQ53_PANMI; ETHYLENE INSENSITIVE 3-like 5 protein
STRINGPavir.Ab01993.1.p2e-59(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.15e-26ETHYLENE-INSENSITIVE3-like 1