PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oropetium_20150105_04746A
Organism
Oropetium thomaeum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
Family EIL
Protein Properties Length: 209aa    MW: 21603.6 Da    PI: 6.9573
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oropetium_20150105_04746AgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN334.63.8e-1194135143182
                                HHHHHHHHHSSSSSS-TTS--TTT--HHH..H---S--HHHH CS
                       EIN3 143 tlgSLLsalmqhcdppqrrfplekgvepP..WWPtGkelwwg 182
                                tl  LLsalm  c pp r+     g  pP  WWPtG+elww 
  Oropetium_20150105_04746A  94 TLARLLSALMASCRPPLRQQDARVGGGPPprWWPTGSELWWV 135
                                7888************777666665444445**********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.102.1E-1382136IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.29E-1285136IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048734.4E-1087138No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MPAQVKVGAH DGLQVPGVVA ASAPKVMTGV ATAAPLVLAH AGGQLVQVPV RFYGYASVAS  60
GGGATKDAAA PSSRAAVVTL LPLAAALDRF HSMTLARLLS ALMASCRPPL RQQDARVGGG  120
PPPRWWPTGS ELWWVPDVPT NRDYRDTGAV VFPTSDLMDQ QLEDMLIQWP VNEAGGDDDL  180
HKLVASGFGK KTNKLSGAAA TQGTSGEE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapOropetium_20150105_04746A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15037818