PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oropetium_20150105_07280A

Organism

Oropetium thomaeum

Taxonomic ID

1148796

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium

Family

BES1

Protein Properties

Length: 94aa MW: 10345.6 Da PI: 11.9768

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oropetium_20150105_07280A	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	80	7.1e-25	47	94	2	49
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnne 49 +s r+pt +ErEnn++RERrRR++aa+iyaGLRa ++y lpk+aD+n+ Oropetium_20150105_07280A 47 TSLRHPTPRERENNRQRERRRRQVAARIYAGLRASAGYVLPKHADQND 94 789********************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	7.8E-18	49	94	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 94 aa Download sequence Send to blast
MEVIAVGAGR KDDEGGEVAA AGPRGCIRST QGPWTVRRRG RGGGVTTSLR HPTPRERENN 60 RQRERRRRQV AARIYAGLRA SAGYVLPKHA DQND

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Oropetium_20150105_07280A

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	1e-61	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004971713.1	1e-27	protein BZR1 homolog 3-like
TrEMBL	J3KWX2	6e-33	J3KWX2_ORYBR; Uncharacterized protein
STRING	OB01G14780.1	1e-33	(Oryza brachyantha)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13201	30	32

Link Out ? help Back to Top
Phytozome	Oropetium_20150105_07280A