PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100001190021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family CPP
Protein Properties Length: 259aa    MW: 28892.8 Da    PI: 8.4158
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100001190021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR47.82.8e-15138177242
                           TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
                                   ++k+CnCk+s+Clk+YCeCfa+g++C+  C+C +C+N+ e+
  Ote100001190021|100001190021 138 KQKQCNCKHSRCLKLYCECFASGVYCDG-CNCVNCHNNVEN 177
                                   89**************************.********9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.8E-17137177IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163418.8138259IPR005172CRC domain
PfamPF036383.5E-12139174IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MEQREAGDFS PNKQRPPQSE DSSPAPSDFP ARKPARQLDF TGFSGGPAAS SPEQPQLAPP  60
RQPAAQQSQP AESSRPPQML FMTMXXXXXX XCAFGPPFDT LSVDDFNPTL TFVIGKPESP  120
RSRPRQNLTE VKDGTPKKQK QCNCKHSRCL KLYCECFASG VYCDGCNCVN CHNNVENEAA  180
RREAVEATLE RNPNAFRPKI ASSPHGARDI MKLLSFSYNF VNSTILHTTA SRYFWLAFGV  240
LLLVNVNNGD KRKNLEFWT
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078441.19e-82protein tesmin/TSO1-like CXC 5
SwissprotQ9SZD15e-53TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLA0A4D9C5L53e-87A0A4D9C5L5_SALSN; Uncharacterized protein
STRINGMigut.K00502.1.p1e-76(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24012455