PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100009660062
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 230aa    MW: 26273.9 Da    PI: 7.218
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100009660062genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM126.52.2e-39101261128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lp+GfrFhPt++elvv+yL++k++g+++++  +i+e+d+yk++Pw+Lp         +    +++ + ++ +r+nra+ +g
  Ote100009660062|100009660062  10 LPAGFRFHPTNDELVVHYLCRKCAGHPISV-PIIAEIDLYKFDPWQLP--------GVVLLLSKRPEIPQRSRPNRAAGTG 81 
                                   799***************************.88**************9........345667777788999********** PP

                           NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatg dk+v +   ++ g+kk Lvfy+g+ap+g+kt+W+mheyrl
  Ote100009660062|100009660062  82 YWKATGADKPVGK--PRTLGIKKALVFYTGKAPNGVKTNWIMHEYRL 126
                                   ***********98..7789**************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-487152IPR003441NAC domain
PROSITE profilePS5100548.02610152IPR003441NAC domain
PfamPF023651.4E-2111126IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MKGGEQQLNL PAGFRFHPTN DELVVHYLCR KCAGHPISVP IIAEIDLYKF DPWQLPGVVL  60
LLSKRPEIPQ RSRPNRAAGT GYWKATGADK PVGKPRTLGI KKALVFYTGK APNGVKTNWI  120
MHEYRLANVD RSAGKRKDLR LDDWVLCRIY NKKGNLEKHN VVIVDEEEAQ FSEMNEHMHF  180
DTSDSEHSQL ICIDNQQLNF MVDGFGDSFL DSQLQQYSQL YAEVQGIDCW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-6621587174Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in disease resistance response (PubMed:16115070, PubMed:19625399). May function as repressor of pathogenesis-related proteins (PubMed:16115070). May function in the regulation of host basal defense responses against viral infection (PubMed:19625399). Transcriptional activator involved in responses to wounding and infection with tobamovirus (TMV) (PubMed:22937923). Binds to the DNA sequences 5'-AAAATATCT-3' and 5'AGATTTTT-3' of CYP734A1/BAS1 and CYP72C1/SOB7 promoters, respectively. Acts as suppressor of the brassinosteroid (BR)-inactivating enzymes CYP734A1/BAS1 and CYP72C1/SOB7, and prevents their expression in almost all tissues. Plays a central role in integrating BR homeostasis and seedling development. Regulates the spatial regulation of BR homeostasis and participates in the regulation of hypocotyl elongation and root growth by suppressing BR catabolism. Mediates connection between BR catabolism and photomorphogenesis (PubMed:26493403). Binds to, and transactivates the promoter of the auxin biosynthetic gene NIT2 (PubMed:22965747). Stress-responsive NAC transcription factor involved in ABA-inducible leaf senescence signaling (PubMed:26518251). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:16115070, ECO:0000269|PubMed:18849494, ECO:0000269|PubMed:19625399, ECO:0000269|PubMed:22937923, ECO:0000269|PubMed:22965747, ECO:0000269|PubMed:26493403, ECO:0000269|PubMed:26518251}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding, salicylic acid (SA), methyl jasmonate, drought stress, dark and sucrose starvation (PubMed:16115070). Induced by chitin elicitor (chitooctaose) (PubMed:17722694). Induced by salicylic acid and infection with tobamovirus (TMV) (PubMed:19625399). By indole-3-acetonitrile, salicylic acid (SA), sodium nitroprusside (SNP), salt stress and drought stress (PubMed:22965747). Down-regulated by brassinosteroid (BR) and transition from dark to white light (PubMed:26493403). {ECO:0000269|PubMed:16115070, ECO:0000269|PubMed:17722694, ECO:0000269|PubMed:19625399, ECO:0000269|PubMed:22965747, ECO:0000269|PubMed:26493403}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097089.12e-98NAC domain-containing protein 2
SwissprotQ9C5985e-84NAC81_ARATH; Protein ATAF2
TrEMBLG8E9N51e-101G8E9N5_SALMI; NAC domain-containing protein 1
STRINGMigut.L00568.1.p6e-97(Erythranthe guttata)
Publications ? help Back to Top
  1. Takasaki H, et al.
    SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence.
    Plant J., 2015. 84(6): p. 1114-23
    [PMID:26518251]