PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100013660001
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 123aa    MW: 14391.5 Da    PI: 11.5322
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100013660001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.99.2e-222677156
                           AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
                                  ++++GVr ++ +gr++AeIrd +     + +r +lg+f+taeeAa+a+++a+++l+g+
  Ote100013660001|100013660001 26 PQFRGVRKRP-WGRFAAEIRDpW-----NkRRKWLGTFDTAEEAAQAYDEAARSLRGN 77
                                  689*******.**********77.....44*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.1E-142676IPR001471AP2/ERF domain
CDDcd000182.21E-252682No hitNo description
SuperFamilySSF541711.7E-202782IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.5E-292782IPR001471AP2/ERF domain
SMARTSM003802.6E-302790IPR001471AP2/ERF domain
PROSITE profilePS5103221.4727112IPR001471AP2/ERF domain
PRINTSPR003675.8E-102839IPR001471AP2/ERF domain
PRINTSPR003675.8E-105066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MVVENLRNDV VRLPASPPPF YVKKRPQFRG VRKRPWGRFA AEIRDPWNKR RKWLGTFDTA  60
EEAAQAYDEA ARSLRGNKAK TNXXXXXXXX XXXXXXXXXX XXXXXXXXXX FPXXXXXXXX  120
IGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1724821170Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082648.16e-34ethylene-responsive transcription factor 14
TrEMBLA0A2G9HEF47e-35A0A2G9HEF4_9LAMI; Uncharacterized protein
STRINGMigut.N02188.1.p2e-30(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA141361212