PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100020890031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Trihelix
Protein Properties Length: 182aa    MW: 21586.2 Da    PI: 8.7143
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100020890031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.15.3e-099393060
                      trihelix 30 lWeevskkmrergferspkqCkekwenlnkr 60
                                   We+vs+k++e gf+rs ++Ckek+e+ +  
  Ote100020890031|100020890031  9 TWEHVSRKLAELGFKRSGEECKEKFEEESSS 39
                                  7************************987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MEIWFPDFTW EHVSRKLAEL GFKRSGEECK EKFEEESSSH FHQNKSYRIL SELDEFYHAH  60
XXXXXXXXXX XXXXDEVDQV RVEKEDAAMN PKPPTKKRKR RGEKLEMLKG FCEAVVKTMM  120
AKQEELHQKL LHDIIKRDEX XXXXXXXXXX XXXXWTASKP RSKSDPKSRN PPLRDRPPSS  180
TS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078730.11e-37trihelix transcription factor GTL2
TrEMBLA0A2R6QLD83e-32A0A2R6QLD8_ACTCH; Trihelix transcription factor
TrEMBLA0A438IH092e-32A0A438IH09_VITVI; Trihelix transcription factor GTL2
STRINGVIT_14s0030g01860.t011e-32(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137001013