PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100022510041
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Trihelix
Protein Properties Length: 229aa    MW: 26105 Da    PI: 10.5502
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100022510041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.92.3e-123974136
                      trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevsk 36
                                  rW++qe+laLi++r++m++++r+++lk+plW+evs+
  Ote100022510041|100022510041 39 RWSRQETLALIKIRSDMDDAFRDSSLKGPLWQEVSS 74
                                  8*********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MMLGVSGLMS SSXXXXXXXX XXXXXXXXXX XXXXXXXNRW SRQETLALIK IRSDMDDAFR  60
DSSLKGPLWQ EVSSLSETLS LDMILILTLE QFSLRFYHTE NVGAWISTKR QEVQXXXXXX  120
XXXXXXFKYH KRTKDGRASK SDGKTYRFSD ELTALENPPP PSMPLSSLIP TRHIIVSSTA  180
LNPINSPPFQ PXXXXXXXXX XXXXXPRLPT RIYSGGRGRR GNGRISSTD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074760.12e-29trihelix transcription factor GT-2-like
TrEMBLA0A438JVV09e-27A0A438JVV0_VITVI; Trihelix transcription factor GT-2