PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100026930081
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 334aa    MW: 37941.1 Da    PI: 5.4323
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100026930081genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.33.8e-29120180259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp++++itY+g H+++
  Ote100026930081|100026930081 120 DDGYSWRKYGQKDILGAKYPRSYYRCTYRqgrNCWATKQVQRSDEDPTIFDITYKGAHTCQ 180
                                   8***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-28115181IPR003657WRKY domain
SuperFamilySSF1182903.92E-25118181IPR003657WRKY domain
SMARTSM007741.2E-37119181IPR003657WRKY domain
PROSITE profilePS5081121.482120177IPR003657WRKY domain
PfamPF031064.8E-27120180IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MERASTWELK LLTDELSQGM EKAMQLRLHL CSTSPSQAED LLLQRIILTF ENALCFLNWN  60
GRVETSISAD ASPRSDDTDT KKNFTDHHSQ GDAYRKRKLQ TTWTEQVKVD SENGLEGPGD  120
DGYSWRKYGQ KDILGAKYPR SYYRCTYRQG RNCWATKQVQ RSDEDPTIFD ITYKGAHTCQ  180
HFKKTAPPPT PPKKQELKRN NSCYDQQEQN PMLSNFKSNL RVNTEVSEIQ EMPPHFSFTS  240
TYACHENENN CSPISALADD NQVGAYSPLF NSPVTSGSSY FSTGMYQRGD YRNDIADILS  300
AYASTTNSPI GGMELSMPVE IDPDFPFNIP AFFT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-17120180969OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101023.11e-154probable WRKY transcription factor 53
TrEMBLA0A0D5Y9910.0A0A0D5Y991_SALMI; WRKY protein
STRINGPGSC0003DMT4000149491e-104(Solanum tuberosum)
STRINGMigut.E01246.1.p1e-105(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18432467