PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100031260021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Trihelix

Protein Properties

Length: 314aa MW: 35295.7 Da PI: 6.4094

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100031260021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.8	1.6e-19	137	201	23	86
trihelix 23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 ++ +kk++W++vsk+m+erg +sp+qC++k+++lnkryk+++e+ +++ ++e++++ +++d l+ Ote100031260021\|100031260021 137 TNLQKKGKWKSVSKVMAERGHFVSPQQCEDKFNDLNKRYKRLNEILGRGtSCEVVEKPALLDVLD 201 3559*********************************************6699999998888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.1E-17	134	227	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MEGNLSSRSA MQGNTSFGGF DLQGPMRVHH HQQQSLAPHH QSNSHLRQGS SIVHHTIHEN 60 FPLTMGSSQE EPTFSLTDYN KLDRGKSASD DDDPSLTEDA ADNRXXXXXX XXXEEGFSMA 120 AEEAAAEYGG GSRRKYTNLQ KKGKWKSVSK VMAERGHFVS PQQCEDKFND LNKRYKRLNE 180 ILGRGTSCEV VEKPALLDVL DHISEKSKEE VRKILSSKHL HYEEMCSYHN GNRLHLPPDL 240 ELQRSLRLAL RSRDDHDENK CRVAKAVVES LESSNRGAKT EYRNANVGIG EGEVQMAEIL 300 SEKGQRVGDD EDGN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074759.1	1e-127	uncharacterized protein LOC105159405
TrEMBL	A0A2G9GZ52	1e-137	A0A2G9GZ52_9LAMI; Uncharacterized protein
STRING	EOY16705	1e-104	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7600	18	30